RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 VPS4BO75351 444 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 SLC43A1O75387 559 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 SEC22BO75396 215 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 RDH16O75452 317 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 LYPLA1O75608 230 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 RSL1D1O76021 490 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MYO1DO94832 1006 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 NSA2O95478 260 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 LYNP07948 512 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 FGF4P08620 206 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 LINC00032P0C843 101 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 KITP10721 976 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 RNH1P13489 461 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 ANPEPP15144 967 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 TCN2P20062 427 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 HIST1H1TP22492 207 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 CERS1P27544 350 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 TLX1P31314 330 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 RORAP35398 523 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 DLSTP36957 453 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 FOLR3P41439 243 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 TSFMP43897 325 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 XCR1P46094 333 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 OR1D4P47884 311 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MAP2K6P52564 334 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 ARFIP1P53367 373 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MAPK12P53778 367 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 FOXA1P55317 472 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 POLE2P56282 527 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 RPS15P62841 145 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 ABRAXAS2Q15018 415 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MLC1Q15049 377 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 NCF4Q15080 339 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 ADPRMQ3LIE5 342 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MINDY4Q4G0A6 757 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 ATP6AP1LQ52LC2 224 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 PDCD4Q53EL6 469 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 TCHHL1Q5QJ38 904 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 CCNYL2Q5T2Q4 361 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 DEPDC1Q5TB30 811 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 C1orf146Q5VVC0 180 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MLIPQ5VWP3 458 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 OR4C11Q6IEV9 310 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 SCIMPQ6UWF3 145 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 FAM198BQ6UWH4 519 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 COMMD6Q7Z4G1 85 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 EGFL6Q8IUX8 553 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 WDR75Q8IWA0 830 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 ULK2Q8IYT8 1036 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 RNF175Q8N4F7 328 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 C1orf52Q8N6N3 182 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 ZNF781Q8N8C0 355 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 ACOT4Q8N9L9 421 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 SLC38A9Q8NBW4 561 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 OR51Q1Q8NH59 317 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 WDR20Q8TBZ3 569 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 ADAMTS18Q8TE60 1221 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 UTP15Q8TED0 518 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 CREB3L4Q8TEY5 395 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 CT55Q8WUE5 264 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 SLC25A43Q8WUT9 341 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 TBC1D20Q96BZ9 403 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 TUBGCP3Q96CW5 907 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 C19orf60Q96EN9 201 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MARS2Q96GW9 593 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 PPP1R36Q96LQ0 422 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 OR1F2PQ96R84 312 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 F2RL3Q96RI0 385 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 SERINC2Q96SA4 455 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 EFHD1Q9BUP0 239 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MRPL1Q9BYD6 325 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 NMUR2Q9GZQ4 415 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 CHST8Q9H2A9 424 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 KLHL31Q9H511 634 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 WDR54Q9H977 334 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 SYNPO2LQ9H987 977 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 WDR41Q9HAD4 459 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 CLK4Q9HAZ1 481 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MKKSQ9NPJ1 570 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 LHX9Q9NQ69 397 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 C14orf105Q9NVL8 296 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 PNPOQ9NVS9 261 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MS4A12Q9NXJ0 267 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 HCN3Q9P1Z3 774 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 VPS29Q9UBQ0 182 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 DKK4Q9UBT3 224 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MARCOQ9UEW3 520 aaPredicted RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 PHF11Q9UIL8 331 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 ZNF225Q9UK10 706 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MRPS33Q9Y291 106 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 MRPS2Q9Y399 296 aaKnown RBP4.04□□□□□ -1.76
SNHG1-208ENST00000538266 DNAJC15Q9Y5T4 150 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 COMMD3-BMI1R4GMX3 469 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 KNTC1P50748 2209 aa4.04□□□□□ -1.76
SNHG1-208ENST00000538266 USP34Q70CQ2 3546 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 SMIM31A0A1B0GVY4 71 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 ATP6AP2A0A1C7CYW4 349 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CDHR4A6H8M9 788 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 NPIPB8E9PQR5 432 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 RTCAO00442 366 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms