RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 PM20D2Q8IYS1 436 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 NAXEQ8NCW5 288 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 OR4N2Q8NGD1 307 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 OR2W6PQ8NHA6 318 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 OR14L1PQ8NHC6 308 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 ABTB1Q969K4 478 aaPredicted RBP13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 EFHD2Q96C19 240 aaPredicted RBP13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 NTNG2Q96CW9 530 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 ERP27Q96DN0 273 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 VSTM2LQ96N03 204 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 TRIB1Q96RU8 372 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 ZNF559Q9BR84 538 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 PRDM14Q9GZV8 571 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 L2HGDHQ9H9P8 463 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 TAS2R9Q9NYW1 312 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 OR10H1Q9Y4A9 318 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 PTGDR2Q9Y5Y4 395 aa13.03□□□□□ -0.32
RTN3P1-201ENST00000536295 OR6C70A6NIJ9 312 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 MYO1GB0I1T2 1018 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 H3BQF6 201 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 PLOD3O60568 738 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 SEC22BO75396 215 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 RSL1D1O76021 490 aaKnown RBP13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 EPPINO95925 133 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 FREM3P0C091 2139 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 UROSP10746 265 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 TCEA1P23193 301 aaKnown RBP13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 NTSP30990 170 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 GCKP35557 465 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 DLX5P56178 289 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 CEBPEQ15744 281 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 NHSL2Q5HYW2 709 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 OR5M10Q6IEU7 315 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 NOXRED1Q6NXP6 359 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 TMEM81Q6P7N7 255 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 TMEM107Q6UX40 140 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 TMEM200AQ86VY9 491 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 LACC1Q8IV20 430 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 WDSUB1Q8N9V3 476 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 GFM2Q969S9 779 aaKnown RBP13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 SLC35A4Q96G79 324 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 WDYHV1Q96HA8 205 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 IQCGQ9H095 443 aaKnown RBP13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 ANKZF1Q9H8Y5 726 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 MYNNQ9NPC7 610 aa13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 EXO1Q9UQ84 846 aaKnown RBP13.02□□□□□ -0.33
RTN3P1-201ENST00000536295 INTS1Q8N201 2190 aaKnown RBP13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 DVL2O14641 736 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 TSPAN2O60636 221 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 ABCB7O75027 752 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 COQ9O75208 318 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 CBR3O75828 277 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 IL2RAP01589 272 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 CAPN3P20807 821 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 UQCRC1P31930 480 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 AGFG1P52594 562 aaKnown RBP13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 SRYQ05066 204 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 SLC18A2Q05940 514 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 EFR3AQ14156 821 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 PCLAFQ15004 111 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 CDH24Q86UP0 819 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 RELL2Q8NC24 303 aaPredicted RBP13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 FAM76AQ8TAV0 307 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 EGLN2Q96KS0 407 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 GATA5Q9BWX5 397 aaPredicted RBP13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 STMN4Q9H169 189 aaPredicted RBP13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 GLIPR2Q9H4G4 154 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 DDX18Q9NVP1 670 aaKnown RBP13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 KCNN3Q9UGI6 736 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 MID2Q9UJV3 735 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 FBXL2Q9UKC9 423 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 WIF1Q9Y5W5 379 aa13.01□□□□□ -0.33
RTN3P1-201ENST00000536295 C17orf51A8MQB3 221 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 SLC28A1O00337 649 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 AZIN1O14977 448 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 RGS14O43566 566 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 SCO2O43819 266 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 ZWINTO95229 277 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 ACTL6AO96019 429 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 TACR1P25103 407 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 CEACAM8P31997 349 aaPredicted RBP13□□□□□ -0.33
RTN3P1-201ENST00000536295 TIMP3P35625 211 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 PNLIPRP2P54317 469 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 PSG6Q00889 435 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 SF3B4Q15427 424 aaKnown RBP eCLIP13□□□□□ -0.33
RTN3P1-201ENST00000536295 CES4AQ5XG92 561 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 NSUN5P2Q63ZY6 315 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 ANKRD26P1Q6NSI1 321 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 ARSKQ6UWY0 536 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 PLCZ1Q86YW0 608 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 TRIM42Q8IWZ5 723 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13□□□□□ -0.33
RTN3P1-201ENST00000536295 APOPT1Q96IL0 206 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 AMDHD1Q96NU7 426 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 OR2B2Q9GZK3 357 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 LRTM1Q9HBL6 345 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 C1orf109Q9NX04 203 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 TAS2R10Q9NYW0 307 aa13□□□□□ -0.33
RTN3P1-201ENST00000536295 DKKL1Q9UK85 242 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms