RNA–Protein interactions for RNA: ENST00000536089.5

MDM2-223, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-223ENST00000536089 FAM89BQ8N5H3 189 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 CLEC1AQ8NC01 280 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 OR2T11Q8NH01 316 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 OR1L3Q8NH93 324 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 RPLP0P6Q8NHW5 317 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 GGHQ92820 318 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 BCL2L2Q92843 193 aaPredicted RBP3.6□□□□□ -1.83
MDM2-223ENST00000536089 FAM46BQ96A09 425 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 NXPE2Q96DL1 559 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 ZNF560Q96MR9 790 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 NEDD4LQ96PU5 975 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 DDX50Q9BQ39 737 aaKnown RBP3.6□□□□□ -1.83
MDM2-223ENST00000536089 CCSER1Q9C0I3 900 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 P2RY12Q9H244 342 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 FAM124BQ9H5Z6 455 aaPredicted RBP3.6□□□□□ -1.83
MDM2-223ENST00000536089 EGLN3Q9H6Z9 239 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 ZCCHC3Q9NUD5 404 aaKnown RBP3.6□□□□□ -1.83
MDM2-223ENST00000536089 PANK4Q9NVE7 773 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 DNAJC11Q9NVH1 559 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 GTSE1Q9NYZ3 720 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 WWOXQ9NZC7 414 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 POMT2Q9UKY4 750 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 MMP17Q9ULZ9 603 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 TMED7Q9Y3B3 224 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 KNTC1P50748 2209 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 URB1O60287 2271 aaKnown RBP3.6□□□□□ -1.83
MDM2-223ENST00000536089 DMDP11532 3685 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 ADAMTS9Q9P2N4 1935 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 ZFYVE26Q68DK2 2539 aa3.6□□□□□ -1.83
MDM2-223ENST00000536089 GOLGA4Q13439 2230 aaKnown RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 APC2O95996 2303 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 A0A087WUV0 522 aaPredicted RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 BICDL2A1A5D9 508 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 BLOC1S5-TXNDC5H3BN57 136 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 I3L4J1 428 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 CDX4O14627 284 aaPredicted RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 VEGFDO43915 354 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 CYTIPO60759 359 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 CLN5O75503 358 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 ZNF432O94892 652 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 PRAMEF12O95522 483 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 MT-ND2P03891 347 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 RAF1P04049 648 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 APODP05090 189 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 SERPINF2P08697 491 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 GSTA2P09210 222 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 CLTAP09496 248 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 ZNF883P0CG24 379 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 AADACP22760 399 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 CTNNA2P26232 953 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 DHPSP49366 369 aaPredicted RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 TAF6P49848 677 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 ADARP55265 1226 aaKnown RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 UCP2P55851 309 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 CDH18Q13634 790 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 ITGA9Q13797 1035 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 CCDC6Q16204 474 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 HFEQ30201 348 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 LCE1AQ5T7P2 110 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 TCEAL6Q6IPX3 200 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 ZNF770Q6IQ21 691 aaPredicted RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 PLBD1Q6P4A8 553 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 CD300LGQ6UXG3 332 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 CHMP1BQ7LBR1 199 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 COX8CQ7Z4L0 72 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 HOGA1Q86XE5 327 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 CATSPER3Q86XQ3 398 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 RTL3Q8N8U3 475 aaKnown RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 DEFB124Q8NES8 71 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 OR6S1Q8NH40 331 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 APOBEC4Q8WW27 367 aaKnown RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 TCEAL3Q969E4 200 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 ZNF524Q96C55 264 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 OTUB2Q96DC9 234 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 PGLYRP2Q96PD5 576 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 MTMR9Q96QG7 549 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 NAP1L3Q99457 506 aaPredicted RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 IL12RB2Q99665 862 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 FAM213AQ9BRX8 229 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 THAP2Q9H0W7 228 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 ABCG4Q9H172 646 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 TNMDQ9H2S6 317 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 C5orf66Q9H5L9 145 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 ECT2Q9H8V3 914 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 C3orf14Q9HBI5 128 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 DUS2Q9NX74 493 aaKnown RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 FETUBQ9UGM5 382 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 FBXL4Q9UKA2 621 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 ELF5Q9UKW6 265 aaPredicted RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 SATB2Q9UPW6 733 aa3.59□□□□□ -1.83
MDM2-223ENST00000536089 TP53BP1Q12888 1972 aaPredicted RBP3.59□□□□□ -1.83
MDM2-223ENST00000536089 COL6A6A6NMZ7 2263 aa3.59□□□□□ -1.84
MDM2-223ENST00000536089 ANKRD11Q6UB99 2663 aaPredicted RBP3.58□□□□□ -1.84
MDM2-223ENST00000536089 COL5A1P20908 1838 aaPredicted RBP3.58□□□□□ -1.84
MDM2-223ENST00000536089 PLXNB3Q9ULL4 1909 aa3.58□□□□□ -1.84
MDM2-223ENST00000536089 MYOFQ9NZM1 2061 aa3.58□□□□□ -1.84
MDM2-223ENST00000536089 IGHV4-4A0A075B6R2 117 aa3.58□□□□□ -1.84
MDM2-223ENST00000536089 TTC26A0AVF1 554 aa3.58□□□□□ -1.84
MDM2-223ENST00000536089 EME2A4GXA9 379 aaPredicted RBP3.58□□□□□ -1.84
MDM2-223ENST00000536089 H0YIG0 161 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms