RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 LPAR4Q99677 370 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 KATNB1Q9BVA0 655 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 TUBB2BQ9BVA1 445 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 OR2B2Q9GZK3 357 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ELOVL4Q9GZR5 314 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 Q9N2K0 584 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 SIX2Q9NPC8 291 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ASCL3Q9NQ33 180 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 NLGN3Q9NZ94 848 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-202ENST00000535689 TUBGCP4Q9UGJ1 667 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 PRDM4Q9UKN5 801 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 EXOC7Q9UPT5 735 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 SATB2Q9UPW6 733 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 WDR83OSQ9Y284 106 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 CSNK1G3Q9Y6M4 447 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 SETD2Q9BYW2 2564 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-202ENST00000535689 PTPRJQ12913 1337 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 NAV3Q8IVL0 2385 aa2.9□□□□□ -1.94
SNHG1-202ENST00000535689 TLN1Q9Y490 2541 aaKnown RBP2.9□□□□□ -1.94
SNHG1-202ENST00000535689 NBPF19A0A087WUL8 3843 aa2.9□□□□□ -1.94
SNHG1-202ENST00000535689 SDK2Q58EX2 2172 aa2.9□□□□□ -1.94
SNHG1-202ENST00000535689 FER1L5A0AVI2 2057 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 TRAV18A0A075B6X5 111 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 C13orf42A0A1B0GVH6 325 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 A0A1W2PPM1 405 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 FAM47DPA6NHR8 397 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 SLC33A1O00400 549 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 ATP6AP2O75787 350 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 GRAP2O75791 330 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 CDC123O75794 336 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 ACSL3O95573 720 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 BAG2O95816 211 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 PIGRP01833 764 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 CISD3P0C7P0 127 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 C8orf89P0DMQ9 161 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 GOT1P17174 413 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 POLR2EP19388 210 aaKnown RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 LHCGRP22888 699 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 TIMP3P35625 211 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 CYCSP99999 105 aaKnown RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 IL9RQ01113 521 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 TMEM30BQ3MIR4 351 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 FAM46CQ5VWP2 391 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 TXNRD3NBQ6F5E7 133 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 NEK5Q6P3R8 708 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 TPGS1Q6ZTW0 290 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 SLC16A9Q7RTY1 509 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 SMIM29Q86T20 159 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 PRUNE1Q86TP1 453 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 PIGZQ86VD9 579 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 ZSCAN30Q86W11 494 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 BBS7Q8IWZ6 715 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 MMD2Q8IY49 270 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 CLYBLQ8N0X4 340 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 CCDC185Q8N715 623 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 GBP7Q8N8V2 638 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 TMEM178AQ8NBL3 297 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 TMEM161BQ8NDZ6 487 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 CCDC112Q8NEF3 446 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 OR11H4Q8NGC9 324 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 OR5AP2Q8NGF4 316 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 OR6S1Q8NH40 331 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 GOT1L1Q8NHS2 421 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 DDI1Q8WTU0 396 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 HEXDCQ8WVB3 486 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 APOBEC4Q8WW27 367 aaKnown RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 FBXO32Q969P5 355 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 WBP2Q969T9 261 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 PYCR2Q96C36 320 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF524Q96C55 264 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 GMPPAQ96IJ6 420 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 LRR1Q96L50 414 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 USP28Q96RU2 1077 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 IL12RB2Q99665 862 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 DDX50Q9BQ39 737 aaKnown RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 C17orf62Q9BQA9 187 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 KRTAP1-5Q9BYS1 174 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 TRIM9Q9C026 710 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 LSG1Q9H089 658 aaKnown RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 WDR13Q9H1Z4 485 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 UBQLN3Q9H347 655 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 Q9H8V8 135 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 MTHFD2LQ9H903 347 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 A4GALTQ9NPC4 353 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 SLC52A3Q9NQ40 469 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 ABCB8Q9NUT2 735 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 INTS9Q9NV88 658 aaKnown RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 FBXL12Q9NXK8 326 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 ODF2LQ9ULJ1 636 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 RUVBL2Q9Y230 463 aaKnown RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 LIPT1Q9Y234 373 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 WDR37Q9Y2I8 494 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 TMED3Q9Y3Q3 217 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 LRP12Q9Y561 859 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 ZFC3H1O60293 1989 aaKnown RBP2.9□□□□□ -1.95
SNHG1-202ENST00000535689 SCN8AQ9UQD0 1980 aa2.9□□□□□ -1.95
SNHG1-202ENST00000535689 RELNP78509 3460 aa2.89□□□□□ -1.95
SNHG1-202ENST00000535689 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.89□□□□□ -1.95
SNHG1-202ENST00000535689 F8VP50 259 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms