RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 SPSB2Q99619 263 aa11.51□□□□□ -0.57
SCARB1-204ENST00000535005 KCTD14Q9BQ13 255 aaPredicted RBP11.51□□□□□ -0.57
SCARB1-204ENST00000535005 SCNM1Q9BWG6 230 aa11.51□□□□□ -0.57
SCARB1-204ENST00000535005 ALG2Q9H553 416 aa11.51□□□□□ -0.57
SCARB1-204ENST00000535005 NECTIN3Q9NQS3 549 aa11.51□□□□□ -0.57
SCARB1-204ENST00000535005 SH3BP4Q9P0V3 963 aa11.51□□□□□ -0.57
SCARB1-204ENST00000535005 GPN3Q9UHW5 284 aaPredicted RBP11.51□□□□□ -0.57
SCARB1-204ENST00000535005 UTS2RQ9UKP6 389 aa11.51□□□□□ -0.57
SCARB1-204ENST00000535005 ERVK-11Q9UQG0 969 aa11.51□□□□□ -0.57
SCARB1-204ENST00000535005 MSRB2Q9Y3D2 182 aa11.51□□□□□ -0.57
SCARB1-204ENST00000535005 CLDN16Q9Y5I7 305 aa11.51□□□□□ -0.57
SCARB1-204ENST00000535005 SDK2Q58EX2 2172 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 IGKV3D-11A0A0A0MRZ8 115 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 SYNDIG1LA6NDD5 238 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 MYO1GB0I1T2 1018 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 BRINP1O60477 761 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 MRPS14O60783 128 aaKnown RBP11.5□□□□□ -0.57
SCARB1-204ENST00000535005 SCN2BO60939 215 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 PGRP06401 933 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 THRBP10828 461 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 EEF1B2P24534 225 aaKnown RBP11.5□□□□□ -0.57
SCARB1-204ENST00000535005 OPRL1P41146 370 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 STAT5AP42229 794 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 WNT3P56703 355 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 PCBP4P57723 403 aaKnown RBP11.5□□□□□ -0.57
SCARB1-204ENST00000535005 PHC1P78364 1004 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 RHAGQ02094 409 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 PGS1Q32NB8 556 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 ANXA8L1Q5VT79 327 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 CPZQ66K79 652 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 OFCC1Q8IZS5 231 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 MAGEE2Q8TD90 523 aaPredicted RBP11.5□□□□□ -0.57
SCARB1-204ENST00000535005 SDCCAG3Q96C92 435 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 CNRIP1Q96F85 164 aaPredicted RBP11.5□□□□□ -0.57
SCARB1-204ENST00000535005 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 RBCK1Q9BYM8 510 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 LHPPQ9H008 270 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 SP140LQ9H930 580 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 CPNE5Q9HCH3 593 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 ACSS1Q9NUB1 689 aaPredicted RBP11.5□□□□□ -0.57
SCARB1-204ENST00000535005 FAM120CQ9NX05 1096 aaKnown RBP11.5□□□□□ -0.57
SCARB1-204ENST00000535005 USE1Q9NZ43 259 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 C5AR2Q9P296 337 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 PCDHGB1Q9Y5G3 927 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 SNX5Q9Y5X3 404 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 ZNF780BQ9Y6R6 833 aa11.5□□□□□ -0.57
SCARB1-204ENST00000535005 CACNA1AO00555 2505 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 C21orf140B9A014 251 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 C9JVG2 144 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 TERTO14746 1132 aaKnown RBP11.49□□□□□ -0.57
SCARB1-204ENST00000535005 FGF17O60258 216 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 UGT2B11O75310 529 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 GABARAPO95166 117 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 SNAP29O95721 258 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 CSNK2A2P19784 350 aaPredicted RBP11.49□□□□□ -0.57
SCARB1-204ENST00000535005 CAPN3P20807 821 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 FUT4P22083 530 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 PCYT1AP49585 367 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 XKP51811 444 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 DGKQP52824 942 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 BTG2P78543 158 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 LRRC74AQ0VAA2 488 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 SERTAD2Q14140 314 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 MLC1Q15049 377 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 LAPTM4BQ86VI4 370 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 SPARTQ8N0X7 666 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 SVOPLQ8N434 492 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 PHF10Q8WUB8 498 aaKnown RBP11.49□□□□□ -0.57
SCARB1-204ENST00000535005 CT55Q8WUE5 264 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 NKD1Q969G9 470 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 ZNF566Q969W8 418 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 EXOSC8Q96B26 276 aaKnown RBP11.49□□□□□ -0.57
SCARB1-204ENST00000535005 GPR87Q9BY21 358 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 ARMC7Q9H6L4 198 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 GIMAP4Q9NUV9 329 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 LEF1Q9UJU2 399 aaPredicted RBP11.49□□□□□ -0.57
SCARB1-204ENST00000535005 DCHS1Q96JQ0 3298 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 CEP295Q9C0D2 2601 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 CCDC154A6NI56 674 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 RNASET2O00584 256 aaKnown RBP11.49□□□□□ -0.57
SCARB1-204ENST00000535005 PDPK1O15530 556 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 LDB3O75112 727 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 BCAS1O75363 584 aaPredicted RBP11.49□□□□□ -0.57
SCARB1-204ENST00000535005 ERAL1O75616 437 aaKnown RBP11.49□□□□□ -0.57
SCARB1-204ENST00000535005 KLF7O75840 302 aaPredicted RBP11.49□□□□□ -0.57
SCARB1-204ENST00000535005 ALPLP05186 524 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 SLC35E2P0CK97 266 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 TCN2P20062 427 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 MPIP34949 423 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 IDUAP35475 653 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 GSSP48637 474 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 EFNA3P52797 238 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 LIPEQ05469 1076 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 SLC13A2Q13183 592 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 NFYCQ13952 458 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 DGUOKQ16854 277 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 VPS26BQ4G0F5 336 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 THOC7Q6I9Y2 204 aaKnown RBP11.49□□□□□ -0.57
SCARB1-204ENST00000535005 OR4F3Q6IEY1 312 aa11.49□□□□□ -0.57
SCARB1-204ENST00000535005 TUBA3EQ6PEY2 450 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms