RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 GLYR1Q49A26 553 aaPredicted RBP18.2■□□□□ 0.5
CAPN1-226ENST00000533820 TMEM201Q5SNT2 666 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 KIF18BQ86Y91 864 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 OR4F15Q8NGB8 312 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 SETD6Q8TBK2 473 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 COQ10AQ96MF6 247 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 USB1Q9BQ65 265 aaKnown RBP18.2■□□□□ 0.5
CAPN1-226ENST00000533820 MS4A8Q9BY19 250 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 GLTPQ9NZD2 209 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 DENND4CQ5VZ89 1909 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 KNL1Q8NG31 2342 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 C2orf92A0A1B0GVN3 265 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 OR6C70A6NIJ9 312 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 PLA2G10O15496 165 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 HPGDSO60760 199 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 LALBAP00709 142 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 RHOP08100 348 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 SSR2P43308 183 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 CCDC149Q6ZUS6 474 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 TBC1D19Q8N5T2 526 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 SLC7A6Q92536 515 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 ZBED6CLQ96FA7 236 aaPredicted RBP18.2■□□□□ 0.5
CAPN1-226ENST00000533820 AIF1LQ9BQI0 150 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 OSGEPL1Q9H4B0 414 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 GLIPR2Q9H4G4 154 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 MAN2C1Q9NTJ4 1040 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 SAGE1Q9NXZ1 904 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 P2RX2Q9UBL9 471 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 ATG2BQ96BY7 2078 aa18.2■□□□□ 0.5
CAPN1-226ENST00000533820 TEX51A0A1B0GUA7 166 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 CPSF4LA6NMK7 179 aaKnown RBP18.19■□□□□ 0.5
CAPN1-226ENST00000533820 DVL2O14641 736 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 HOXB3P14651 431 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-226ENST00000533820 RNF144AP50876 292 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-226ENST00000533820 WNT4P56705 351 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 ZNF791Q3KP31 576 aaPredicted RBP18.19■□□□□ 0.5
CAPN1-226ENST00000533820 SLC30A6Q6NXT4 461 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 GDPGP1Q6ZNW5 385 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 SLC30A8Q8IWU4 369 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 CCDC116Q8IYX3 515 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 RNF170Q96K19 258 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 FAM83CQ9BQN1 747 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 DPH7Q9BTV6 452 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 NEUROD4Q9HD90 331 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.19■□□□□ 0.5
CAPN1-226ENST00000533820 EVA1BQ9NVM1 165 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 DIMT1Q9UNQ2 313 aaKnown RBP18.19■□□□□ 0.5
CAPN1-226ENST00000533820 SMLR1H3BR10 107 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 SERPINI2O75830 405 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 EPPINO95925 133 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 CHRM4P08173 479 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 ITGB7P26010 798 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 DDOSTP39656 456 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 FNDC3BQ53EP0 1204 aaKnown RBP18.19■□□□□ 0.5
CAPN1-226ENST00000533820 CNKSR3Q6P9H4 555 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 LILRB2Q8N423 598 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 LHFPL5Q8TAF8 219 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 FAM46AQ96IP4 442 aaKnown RBP18.19■□□□□ 0.5
CAPN1-226ENST00000533820 FRMD6Q96NE9 622 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 LRRC3BQ96PB8 259 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 BBS4Q96RK4 519 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 MTCL1Q9Y4B5 1905 aaKnown RBP18.19■□□□□ 0.5
CAPN1-226ENST00000533820 A0A1B0GVC2 190 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 IQCMA0A1B0GVH7 501 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 CIB4A0PJX0 185 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 SYNDIG1LA6NDD5 238 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 HMX3A6NHT5 357 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 A6NIN4 97 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 MOSPD3O75425 235 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 RB1P06400 928 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 CELP19835 753 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 COL19A1Q14993 1142 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 NDUFAF5Q5TEU4 345 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 LILRA6Q6PI73 481 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 OR4M1Q8NGD0 313 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 OR8D4Q8NGM9 314 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 LGR4Q9BXB1 951 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 KIAA1671Q9BY89 1806 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 SAP130Q9H0E3 1048 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 ZBP1Q9H171 429 aa18.19■□□□□ 0.5
CAPN1-226ENST00000533820 SCN2AQ99250 2005 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 SLC30A4O14863 429 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 NDUFS4O43181 175 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 ADH1AP07327 375 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 CCNYL3P0C7X3 344 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 CSF2RAP15509 400 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 PPP2R1BP30154 601 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 ATP6V1E1P36543 226 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 AVPR1BP47901 424 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 SLC6A11P48066 632 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 PCBP4P57723 403 aaKnown RBP18.18■□□□□ 0.5
CAPN1-226ENST00000533820 ERVFC1P60507 584 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 IL18Q14116 193 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 OCLNQ16625 522 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.18■□□□□ 0.5
CAPN1-226ENST00000533820 CNIH2Q6PI25 160 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 FAM26EQ8N5C1 309 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 POLDIP3Q9BY77 421 aaKnown RBP18.18■□□□□ 0.5
CAPN1-226ENST00000533820 OR52A5Q9H2C5 316 aa18.18■□□□□ 0.5
CAPN1-226ENST00000533820 KLHL31Q9H511 634 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms