RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 SPRY4Q9C004 299 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 VN1R1Q9GZP7 353 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 OR51I1Q9H343 314 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 A4GALTQ9NPC4 353 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 SEMA3GQ9NS98 782 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 PCDHGA8Q9Y5G5 932 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 OR10H2O60403 315 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 RECKO95980 971 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 ATP1B1P05026 303 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 SLC35E2P0CK97 266 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 OR12D1P0DN82 309 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 SELENOWP63302 87 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 MRPL14Q6P1L8 145 aaKnown RBP17.24■□□□□ 0.35
SMPD1-208ENST00000533123 DGAT2L6Q6ZPD8 337 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 QSOX2Q6ZRP7 698 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 CCDC80Q76M96 950 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 ZDHHC13Q8IUH4 622 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 SMYD1Q8NB12 490 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 RBM18Q96H35 190 aaKnown RBP17.24■□□□□ 0.35
SMPD1-208ENST00000533123 TMEM19Q96HH6 336 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 POLR1BQ9H9Y6 1135 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 MMACHCQ9Y4U1 282 aa17.24■□□□□ 0.35
SMPD1-208ENST00000533123 PRAMEF27A3QJZ7 478 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 SNAP29O95721 258 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 DLGAP3O95886 979 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 TFPTP0C1Z6 253 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 NT5EP21589 574 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 DCTP40126 519 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 IGLV3-21P80748 117 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-208ENST00000533123 LASP1Q14847 261 aaKnown RBP17.23■□□□□ 0.35
SMPD1-208ENST00000533123 MYBPC3Q14896 1274 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 NSDHLQ15738 373 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 FAM69BQ5VUD6 431 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 REEP3Q6NUK4 255 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 C6orf15Q6UXA7 325 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-208ENST00000533123 TMEM64Q6YI46 380 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 TFAP2CQ92754 450 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 C16orf58Q96GQ5 468 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 SMURF2Q9HAU4 748 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 SMPD3Q9NY59 655 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-208ENST00000533123 PADI1Q9ULC6 663 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 VSTM2BA6NLU5 285 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 E2F6O75461 281 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 ALBP02768 609 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 HMGN2P05204 90 aaKnown RBP17.23■□□□□ 0.35
SMPD1-208ENST00000533123 GNAO1P09471 354 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 PABPC4LP0CB38 370 aaKnown RBP17.23■□□□□ 0.35
SMPD1-208ENST00000533123 MATN1P21941 496 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 OR1E2P47887 323 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 DAG1Q14118 895 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 LAPTM4AQ15012 233 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 IQCCQ4KMZ1 466 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 CRB2Q5IJ48 1285 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 FAM111BQ6SJ93 734 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 FAM198BQ6UWH4 519 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 OLIG3Q7RTU3 272 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 SPPL2AQ8TCT8 520 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 ELP4Q96EB1 424 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 C7orf34Q96L11 122 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 SLC46A1Q96NT5 459 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 SPSB2Q99619 263 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 BARD1Q99728 777 aaKnown RBP17.23■□□□□ 0.35
SMPD1-208ENST00000533123 ADI1Q9BV57 179 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 SLC26A1Q9H2B4 701 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 C14orf105Q9NVL8 296 aa17.23■□□□□ 0.35
SMPD1-208ENST00000533123 GPN3Q9UHW5 284 aaPredicted RBP17.23■□□□□ 0.35
SMPD1-208ENST00000533123 NUP210LQ5VU65 1888 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 IGKV3D-11A0A0A0MRZ8 115 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 C5orf58C9J3I9 102 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 IFNA16P05015 189 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 CCNYL3P0C7X3 344 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 HOXB6P17509 224 aaKnown RBP17.22■□□□□ 0.35
SMPD1-208ENST00000533123 PRKACGP22612 351 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 SOX18P35713 384 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 SYPL1Q16563 259 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 FAAH2Q6GMR7 532 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 OR2T5Q6IEZ7 315 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 TSEN54Q7Z6J9 526 aaKnown RBP17.22■□□□□ 0.35
SMPD1-208ENST00000533123 CARM1Q86X55 608 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 SIMC1Q8NDZ2 872 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 OR2T29Q8NH02 315 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 SFXN5Q8TD22 340 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 XAGE5Q8WWM1 108 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 FKBP10Q96AY3 582 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 DGAT2Q96PD7 388 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 VCX3AQ9NNX9 186 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 EQTNQ9NQ60 294 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 C8orf4Q9NR00 106 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 COMMD3-BMI1R4GMX3 469 aa17.22■□□□□ 0.35
SMPD1-208ENST00000533123 PRAMEF25A6NGN4 478 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 IDSB3KWA1 339 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 C9J4A7 227 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 ALPLP05186 524 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 CT62P0C5K7 136 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 SLC5A2P31639 672 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 STT3AP46977 705 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 ALDH3A2P51648 485 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 CHN2P52757 468 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 MERTKQ12866 999 aa17.21■□□□□ 0.35
SMPD1-208ENST00000533123 SERTAD2Q14140 314 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms