RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 OR9A4Q8NGU2 314 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SMIM14Q96QK8 99 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 BARD1Q99728 777 aaKnown RBP10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF559Q9BR84 538 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ATP13A2Q9NQ11 1180 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 CCM2LQ9NUG4 571 aaPredicted RBP10.69□□□□□ -0.7
PTPRK-221ENST00000532331 CAMK2AQ9UQM7 478 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 BCORQ6W2J9 1755 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 H3BML4 177 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 L7N2F9 121 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 APOC1P02654 83 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SPARCP09486 303 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 VAMP2P63027 116 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 MALLQ13021 153 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 GPR18Q14330 331 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SCGB2B2Q4G0G5 96 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SYT13Q7L8C5 426 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 PAQR7Q86WK9 346 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 WFDC5Q8TCV5 224 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 TEX13CA0A0J9YWL9 993 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 TMEM221A6NGB7 291 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 H0YGG7 62 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 M0R296 226 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 HPRP00739 348 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 PENKP01210 267 aaPredicted RBP10.69□□□□□ -0.7
PTPRK-221ENST00000532331 PRH1P02810 166 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 RHCEP18577 417 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SLC9A3P48764 834 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 MLLT10P55197 1068 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ARPC4P59998 168 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 ARF3P61204 181 aaPredicted RBP10.69□□□□□ -0.7
PTPRK-221ENST00000532331 DGLUCYQ7Z3D6 616 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 HDAC2Q92769 488 aaKnown RBP10.69□□□□□ -0.7
PTPRK-221ENST00000532331 S100A16Q96FQ6 103 aaKnown RBP10.69□□□□□ -0.7
PTPRK-221ENST00000532331 MACROD1Q9BQ69 325 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 PLEKHA6Q9Y2H5 1048 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 SDK1Q7Z5N4 2213 aa10.69□□□□□ -0.7
PTPRK-221ENST00000532331 A0A1B0GUL6 1792 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 S1PR1P21453 382 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 PSMB5P28074 263 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 SFTPDP35247 375 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 SPEM2Q0P670 501 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 C6orf15Q6UXA7 325 aaPredicted RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF615Q8N8J6 731 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 NAXEQ8NCW5 288 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 OR51Q1Q8NH59 317 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 FAM117AQ9C073 453 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 TRPV4Q9HBA0 871 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 MED11Q9P086 117 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 DNAJC15Q9Y5T4 150 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 RAB15P59190 212 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 RPS26P62854 115 aaKnown RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 PRKCDQ05655 676 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 PRDX1Q06830 199 aaKnown RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 GALNT1Q10472 559 aaPredicted RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 COQ5Q5HYK3 327 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 SLC15A3Q8IY34 581 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 SGTBQ96EQ0 304 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 DPAGT1Q9H3H5 408 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 SARDHQ9UL12 918 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 MKLN1Q9UL63 735 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 LDB3O75112 727 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 PRDX3P30048 256 aaKnown RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 RAB11FIP2Q7L804 512 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF480Q8WV37 535 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 MOCOSQ96EN8 888 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 MNTQ99583 582 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 ELF4Q99607 663 aaPredicted RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 ARNT2Q9HBZ2 717 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 NENFQ9UMX5 172 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 TMA7Q9Y2S6 64 aaKnown RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 H3BSA7 217 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 H3BSH0 61 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 NARSO43776 548 aaKnown RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 OXSR1O95747 527 aaPredicted RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF43P17038 809 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 IVDP26440 423 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 ACTC1P68032 377 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 ACTA1P68133 377 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 SH3BP2P78314 561 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 BNIP3Q12983 259 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 EEF1A1P5Q5VTE0 462 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 C6orf89Q6UWU4 347 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 MAMDC2Q7Z304 686 aaPredicted RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 C1orf210Q8IVY1 113 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 SEMA6CQ9H3T2 930 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 METTL8Q9H825 291 aaKnown RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 MTHFD2LQ9H903 347 aaPredicted RBP10.68□□□□□ -0.7
PTPRK-221ENST00000532331 IGSF5Q9NSI5 407 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 SCN9AQ15858 1988 aa10.68□□□□□ -0.7
PTPRK-221ENST00000532331 H0YJX3 145 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 FLRT2O43155 660 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 KCNK5O95279 499 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 KCNAB2Q13303 367 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF789Q5FWF6 425 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 METTL2BQ6P1Q9 378 aaKnown RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 IL20RBQ6UXL0 311 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 ZNF551Q7Z340 670 aaPredicted RBP10.67□□□□□ -0.7
PTPRK-221ENST00000532331 HMGN2P46Q86SG4 172 aa10.67□□□□□ -0.7
PTPRK-221ENST00000532331 UEVLDQ8IX04 471 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms