RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 KRT6BP04259 564 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 PRR35P0CG20 571 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 TMIGD3P0DMS9 266 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 CPN2P22792 545 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 GCH1P30793 250 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 CASRP41180 1078 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 KRT6CP48668 564 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ARFIP1P53367 373 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 NAGLUP54802 743 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 PKNOX1P55347 436 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 OR4D2P58180 307 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 DNAJB13P59910 316 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 NAA20P61599 178 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 SLC18A2Q05940 514 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZNF844Q08AG5 666 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 STX4Q12846 297 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 LCP2Q13094 533 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 SLAMF1Q13291 335 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 DCTN2Q13561 401 aaKnown RBP5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 EXT1Q16394 746 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZNF674Q2M3X9 581 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 BTBD16Q32M84 506 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 KRT71Q3SY84 523 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 NADK2Q4G0N4 442 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 C19orf54Q5BKX5 351 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 CRB2Q5IJ48 1285 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 CFAP157Q5JU67 520 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 LIPMQ5VYY2 423 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 PLAG1Q6DJT9 500 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 RAB12Q6IQ22 244 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 KRT80Q6KB66 452 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 PAPD4Q6PIY7 484 aaKnown RBP5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 IGFL3Q6UXB1 125 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ISLR2Q6UXK2 745 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZNF793Q6ZN11 406 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 LINC00696Q6ZRV3 163 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 FAM214BQ7L5A3 538 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 TRABD2AQ86V40 505 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 NUDT13Q86X67 352 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZNF595Q8IYB9 648 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZCCHC7Q8N3Z6 543 aaKnown RBP5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZADH2Q8N4Q0 377 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 SLC15A4Q8N697 577 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 BANPQ8N9N5 519 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 SELENOMQ8WWX9 145 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 WFDC12Q8WWY7 111 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 KTI12Q96EK9 354 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZNF764Q96H86 408 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 SMC6Q96SB8 1091 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ZNF382Q96SR6 550 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 CSF3RQ99062 836 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 TMEM109Q9BVC6 243 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 C12orf65Q9H3J6 166 aaKnown RBP5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 MID1IP1Q9NPA3 183 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 PRTFDC1Q9NRG1 225 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 NMRK1Q9NWW6 199 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 MS4A12Q9NXJ0 267 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 AHSPQ9NZD4 102 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 PTGFRNQ9P2B2 879 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 TEKT2Q9UIF3 430 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 FBXW2Q9UKT8 454 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 MMACHCQ9Y4U1 282 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 SPTBP11277 2137 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 PCSK5Q92824 1860 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 MGAQ8IWI9 3026 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 LOC400499M0QZD8 3231 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 A0A0A6YYD5 115 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 A0A1W2PR48 441 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 AQP7P3A6NL99 342 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 A8MUA0 341 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 A8MUI8 341 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 H3BQF6 201 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 RAB27BO00194 218 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 MANBAO00462 879 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CYR61O00622 381 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 RGS16O15492 202 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 RRP9O43818 475 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 FMO6PO60774 539 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SPAG7O75391 227 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 EEDO75530 441 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CRCPO75575 148 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 MYO1DO94832 1006 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SEMA3DO95025 777 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ETHE1O95571 254 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ESRRBO95718 433 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 PDYNP01213 254 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 IFNA16P05015 189 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CD1AP06126 327 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ENO1P06733 434 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CELA2AP08217 269 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 FAM58BPP0C7Q3 252 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 ITGAMP11215 1152 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 PLA2G2AP14555 144 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 MAPK3P27361 379 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 NOS3P29474 1203 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 HMOX2P30519 316 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 TLX1P31314 330 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 CAPZA2P47755 286 aa5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 HNRNPFP52597 415 aaKnown RBP5.38□□□□□ -1.55
HMGB1P42-201ENST00000532126 SLC26A5P58743 744 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms