RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 DSN1Q9H410 356 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 ANKRA2Q9H9E1 313 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 SAYSD1Q9NPB0 183 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 AHSPQ9NZD4 102 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 CPSF2Q9P2I0 782 aaKnown RBP8.34□□□□□ -1.07
NEDD8-206ENST00000531430 PRODH2Q9UF12 536 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 PSME2Q9UL46 239 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 CLEC4AQ9UMR7 237 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 PLLPQ9Y342 182 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 ZNF780BQ9Y6R6 833 aa8.34□□□□□ -1.07
NEDD8-206ENST00000531430 GOLGA6L10A6NI86 522 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 C17orf51A8MQB3 221 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 H3BML4 177 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 HAX1O00165 279 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 CLOCKO15516 846 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 SCO2O43819 266 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 ZIC3O60481 467 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 CLDN9O95484 217 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 PLGP00747 810 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-206ENST00000531430 LTA4HP09960 611 aaKnown RBP8.33□□□□□ -1.08
NEDD8-206ENST00000531430 CSNK2A2P19784 350 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-206ENST00000531430 S1PR1P21453 382 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 DRD5P21918 477 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 GRK2P25098 689 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 IL12BP29460 328 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 IDUAP35475 653 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 GP5P40197 560 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 PPICP45877 212 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 SUCLG1P53597 346 aaKnown RBP8.33□□□□□ -1.08
NEDD8-206ENST00000531430 MAPK12P53778 367 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 CTBP2P56545 445 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 GPX6P59796 221 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 MRPS25P82663 173 aaKnown RBP8.33□□□□□ -1.08
NEDD8-206ENST00000531430 MRPS35P82673 323 aaKnown RBP8.33□□□□□ -1.08
NEDD8-206ENST00000531430 MAP4K2Q12851 820 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 DLG1Q12959 904 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 STX5Q13190 355 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 GTF2H2Q13888 395 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 PON3Q15166 354 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 LTB4RQ15722 352 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 BCL2A1Q16548 175 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 PRICKLE4Q2TBC4 344 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 SH2D4BQ5SQS7 431 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 GTF2H2CQ6P1K8 395 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 C3orf62Q6ZUJ4 267 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 SH2D5Q6ZV89 423 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 LARP4Q71RC2 724 aaKnown RBP eCLIP8.33□□□□□ -1.082e-13■■■■■ 29.6
NEDD8-206ENST00000531430 CCDC116Q8IYX3 515 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 CEP112Q8N8E3 955 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 C17orf47Q8NEP4 570 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 FNDC9Q8TBE3 224 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 AKAP1Q92667 903 aaKnown RBP eCLIP8.33□□□□□ -1.082e-7■■□□□ 11.6
NEDD8-206ENST00000531430 KLHL29Q96CT2 875 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 UBXN10Q96LJ8 280 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 MRPL1Q9BYD6 325 aaKnown RBP8.33□□□□□ -1.08
NEDD8-206ENST00000531430 STMN4Q9H169 189 aaPredicted RBP8.33□□□□□ -1.08
NEDD8-206ENST00000531430 NOL11Q9H8H0 719 aaKnown RBP8.33□□□□□ -1.08
NEDD8-206ENST00000531430 MED11Q9P086 117 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 PPP4R1LQ9P1A2 415 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 ZNF337Q9Y3M9 751 aa8.33□□□□□ -1.08
NEDD8-206ENST00000531430 OR6C70A6NIJ9 312 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 SYCE1LA8MT33 242 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 H0YIV9 168 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 ACOX3O15254 700 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 EMC8O43402 210 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 KLF4O43474 513 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 HCRTR2O43614 444 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 KERAO60938 352 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 GUCY1B2O75343 617 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 SIX3O95343 332 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 WISP3O95389 354 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 OPN1LWP04000 364 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 THBDP07204 575 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 PCSK2P16519 638 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 CRABP2P29373 138 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 RFX3P48380 749 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 CCNG1P51959 295 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 ARFIP1P53367 373 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 DSCR4P56555 118 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 CLDN15P56746 228 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 RPS3AP61247 264 aaKnown RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 RPS4XP62701 263 aaKnown RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 MGAT2Q10469 447 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 FAPQ12884 760 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 ILF2Q12905 390 aaKnown RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 IFT88Q13099 833 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 E2F2Q14209 437 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 CAPRIN1Q14444 709 aaKnown RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 CTU2Q2VPK5 515 aaKnown RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 CHRFAM7AQ494W8 412 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 GRTP1Q5TC63 336 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 PAGE2Q7Z2X7 111 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 GOLGA7Q7Z5G4 137 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 SLC44A2Q8IWA5 706 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 KCTD4Q8WVF5 259 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 KAT2AQ92830 837 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 EFHD2Q96C19 240 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 ZBED6CLQ96FA7 236 aaPredicted RBP8.32□□□□□ -1.08
NEDD8-206ENST00000531430 ATOH8Q96SQ7 321 aa8.32□□□□□ -1.08
NEDD8-206ENST00000531430 GPR22Q99680 433 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms