RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 FFAR2O15552 330 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 LATO43561 262 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 CHRM1P11229 460 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-229ENST00000531014 C6P13671 934 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 NFYAP23511 347 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-229ENST00000531014 GGT2P36268 569 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 PLGLB1Q02325 96 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 CAMK2DQ13557 499 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 LEXMQ3ZCV2 418 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 LCN10Q6JVE6 187 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 B3GLCTQ6Y288 498 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 TMPPEQ6ZT21 453 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 ZNF561Q8N587 486 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 DTX3Q8N9I9 347 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 AKR7LQ8NHP1 331 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 FANK1Q8TC84 345 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 PYCR2Q96C36 320 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 FCRL3Q96P31 734 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-229ENST00000531014 CYP2S1Q96SQ9 504 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 DPYSL5Q9BPU6 564 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 BCL7BQ9BQE9 202 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 LDAHQ9H6V9 325 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 ACKR4Q9NPB9 350 aa6.9□□□□□ -1.3
CTNND1-229ENST00000531014 TESQ9UGI8 421 aaKnown RBP6.9□□□□□ -1.3
CTNND1-229ENST00000531014 DNMT3AQ9Y6K1 912 aaPredicted RBP6.9□□□□□ -1.3
CTNND1-229ENST00000531014 TBC1D3DA0A087WVF3 549 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TBC1D3IA0A087WXS9 549 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TBC1D3EA0A087X179 549 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TBC1D3KA0A087X1G2 549 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TBC1D3FA6NER0 549 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TBC1D3LB9A6J9 549 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 FANCGO15287 622 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 B4GAT1O43505 415 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 NDST3O95803 873 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 F2P00734 622 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 LPLP06858 475 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TBC1D3HP0C7X1 549 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TRHRP34981 398 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 PBX2P40425 430 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 MC3RP41968 323 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 POU3F4P49335 361 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 ARSFP54793 590 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 OC90Q02509 493 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 ABHD18Q0P651 414 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SF3A2Q15428 464 aaKnown RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SPHARQ15513 63 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 CEBPEQ15744 281 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 PCGF3Q3KNV8 242 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 ITPRIPL2Q3MIP1 535 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SLC36A3Q495N2 470 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TBC1D3GQ6DHY5 549 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TBC1D3CQ6IPX1 549 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 RPL13AP3Q6NVV1 102 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 UNQ6126/PRO20091Q6UXV3 157 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TMEM150AQ86TG1 271 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 PHF13Q86YI8 300 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TBC1D3Q8IZP1 549 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 ANKRD53Q8N9V6 530 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TXNDC5Q8NBS9 432 aaKnown RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 NANPQ8TBE9 248 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SLC2A12Q8TD20 617 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 DENND1AQ8TEH3 1009 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 CHAC2Q8WUX2 184 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TOMM40LQ969M1 308 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 PGAM5Q96HS1 289 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SLC29A1Q99808 456 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SMIM3Q9BZL3 60 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 OPA3Q9H6K4 179 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 Q9N2J8 555 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 ZNF331Q9NQX6 463 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 NAALAD2Q9Y3Q0 740 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 KRBA1A5PL33 1030 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 LACTBL1A8MY62 500 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 H3BNC9 293 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SOX1O00570 391 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 OR2T1O43869 369 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SUSD5O60279 629 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 CREG1O75629 220 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 FAM155BO75949 473 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 C7P10643 843 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 PPP3CBP16298 524 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 GABRA2P47869 451 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 CLRN1P58418 232 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SIGLEC14Q08ET2 396 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SLC14A1Q13336 389 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 ADIRFQ15847 76 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 DUOXA1Q1HG43 343 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 TEX44Q53QW1 395 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SFT2D3Q587I9 215 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 C6orf141Q5SZD1 244 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 C10orf62Q5T681 223 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 ANKS1BQ7Z6G8 1248 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 OR4E2Q8NGC2 313 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 BIRC7Q96CA5 298 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 C14orf79Q96F83 325 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 SNX18Q96RF0 628 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 FUCA2Q9BTY2 467 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 RAB11FIP5Q9BXF6 653 aa6.9□□□□□ -1.31
CTNND1-229ENST00000531014 FAM124BQ9H5Z6 455 aaPredicted RBP6.9□□□□□ -1.31
CTNND1-229ENST00000531014 RIOX1Q9H6W3 641 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms