RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 RERGQ96A58 199 aaPredicted RBP11.04□□□□□ -0.64
USF1-208ENST00000528768 BMFQ96LC9 184 aa11.04□□□□□ -0.64
USF1-208ENST00000528768 Q96MT0 163 aa11.04□□□□□ -0.64
USF1-208ENST00000528768 COL21A1Q96P44 957 aa11.04□□□□□ -0.64
USF1-208ENST00000528768 LHPPQ9H008 270 aa11.04□□□□□ -0.64
USF1-208ENST00000528768 KLHL31Q9H511 634 aa11.04□□□□□ -0.64
USF1-208ENST00000528768 SLAMF7Q9NQ25 335 aa11.04□□□□□ -0.64
USF1-208ENST00000528768 ACER3Q9NUN7 267 aa11.04□□□□□ -0.64
USF1-208ENST00000528768 SPHK1Q9NYA1 384 aa11.04□□□□□ -0.64
USF1-208ENST00000528768 SCHIP1Q9P0W5 487 aaPredicted RBP11.04□□□□□ -0.64
USF1-208ENST00000528768 KLF15Q9UIH9 416 aa11.04□□□□□ -0.64
USF1-208ENST00000528768 PNMA8BQ9ULN7 279 aaPredicted RBP11.04□□□□□ -0.64
USF1-208ENST00000528768 CDC14AQ9UNH5 594 aa11.04□□□□□ -0.64
USF1-208ENST00000528768 SPTAN1Q13813 2472 aaKnown RBP11.04□□□□□ -0.64
USF1-208ENST00000528768 A0A0G2JN53 185 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 A0A1W2PR48 441 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 A0A1W2PR77 199 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 SH3D21A4FU49 640 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 TMEM229AB2RXF0 380 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 PROM1O43490 865 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 B3GALT2O43825 422 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 UGT2B17O75795 530 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 AIFM1O95831 613 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 WNT1P04628 370 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 GP1BAP07359 652 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 OR12D1P0DN82 309 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 CD247P20963 164 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 CPN2P22792 545 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 PCSK6P29122 969 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 RBMS1P29558 406 aaKnown RBP11.03□□□□□ -0.64
USF1-208ENST00000528768 PEBP1P30086 187 aaKnown RBP11.03□□□□□ -0.64
USF1-208ENST00000528768 IFNGR2P38484 337 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 SERPINB10P48595 397 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 BLKP51451 505 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 HPCAP84074 193 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 DAB2P98082 770 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 HYAL2Q12891 473 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 NFATC3Q12968 1075 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 CDCP2Q5VXM1 449 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 ZNF793Q6ZN11 406 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 CCDC81Q6ZN84 652 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 Q6ZSR6 202 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 KANSL1Q7Z3B3 1105 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 OOSP2Q86WS3 158 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 ANKRD13BQ86YJ7 626 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 OR52J3Q8NH60 311 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 C9orf43Q8TAL5 461 aaPredicted RBP11.03□□□□□ -0.64
USF1-208ENST00000528768 FAM81AQ8TBF8 368 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 RAB8BQ92930 207 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 TSACCQ96A04 125 aaPredicted RBP11.03□□□□□ -0.64
USF1-208ENST00000528768 FKBP10Q96AY3 582 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 FNDC11Q9BVV2 318 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 DGCR6LQ9BY27 220 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 UCK2Q9BZX2 261 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 ABCG4Q9H172 646 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 CLN6Q9NWW5 311 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 KLHL28Q9NXS3 571 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 ACTR10Q9NZ32 417 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 ERVK-18Q9QC07 812 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 KCND3Q9UK17 655 aa11.03□□□□□ -0.64
USF1-208ENST00000528768 GPC6Q9Y625 555 aaPredicted RBP11.03□□□□□ -0.64
USF1-208ENST00000528768 OR2A25A4D2G3 310 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 EFCAB10A6NFE3 127 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 TRIM64BA6NI03 449 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 E9PQ18 207 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 SLC22A1O15245 554 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 ZSCAN9O15535 394 aaPredicted RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 XPNPEP2O43895 674 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 SLITRK5O94991 958 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 TNFRSF1BP20333 461 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 CBLP22681 906 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 AK4P27144 223 aaPredicted RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 CERS1P27544 350 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 SLC19A1P41440 591 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 LIMS1P48059 325 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 MAPK10P53779 464 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 PRKAG1P54619 331 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 RAB8AP61006 207 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 RPS26P62854 115 aaKnown RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 OCA2Q04671 838 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 EMX1Q04741 257 aaPredicted RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 ALG11Q2TAA5 492 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 GPAT3Q53EU6 434 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 FGD3Q5JSP0 725 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 GTF2IRD2BQ6EKJ0 949 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 LAIR2Q6ISS4 152 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 FIGLAQ6QHK4 219 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 TSEN54Q7Z6J9 526 aaKnown RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 GTF2IRD2Q86UP8 949 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 CCDC116Q8IYX3 515 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 AQP11Q8NBQ7 271 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 NUP43Q8NFH3 380 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 OR4K14Q8NGD5 310 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 RHOXF1Q8NHV9 184 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 UTP15Q8TED0 518 aaKnown RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 RSC1A1Q92681 617 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 NRTNQ99748 197 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 TREX2Q9BQ50 279 aaPredicted RBP11.02□□□□□ -0.65
USF1-208ENST00000528768 COPS4Q9BT78 406 aa11.02□□□□□ -0.65
USF1-208ENST00000528768 DCUN1D5Q9BTE7 237 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms