RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SLC7A9P82251 487 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 ALDH6A1Q02252 535 aaKnown RBP11.78□□□□□ -0.52
CAPN1-208ENST00000527323 MAP4K2Q12851 820 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 MAB21L1Q13394 359 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 TPBGQ13641 420 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 QSOX2Q6ZRP7 698 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 RRM2BQ7LG56 351 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 DTX3Q8N9I9 347 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 IL17RCQ8NAC3 791 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 SLC37A3Q8NCC5 494 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 OTULINQ96BN8 352 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 GPA33Q99795 319 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 YIPF4Q9BSR8 244 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 GALNT9Q9HCQ5 603 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 ZSCAN32Q9NX65 697 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 ICKQ9UPZ9 632 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 ITM2BQ9Y287 266 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 A0A0X1KG70 313 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 C2orf92A0A1B0GVN3 265 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 PRRT4C9JH25 899 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 INMT-MINDY4F8WBC2 141 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 SEC14L5O43304 696 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 NOS1APO75052 506 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-208ENST00000527323 TP53P04637 393 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-208ENST00000527323 SERPIND1P05546 499 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 PPP2R1BP30154 601 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 CD79BP40259 229 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 CTBP2P56545 445 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 RAB40BQ12829 278 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 DHCR24Q15392 516 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 MZT2AQ6P582 158 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 SLC36A4Q6YBV0 504 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 TDHQ8IZJ6 230 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 TMEM163Q8TC26 289 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 SGPP1Q9BX95 441 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 SAP130Q9H0E3 1048 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 NIPAL2Q9H841 368 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 PCDHGB7Q9Y5F8 929 aa11.78□□□□□ -0.52
CAPN1-208ENST00000527323 PLXNB3Q9ULL4 1909 aa11.77□□□□□ -0.52
CAPN1-208ENST00000527323 A0A0G2JN53 185 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 ZSCAN5BA6NJL1 495 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 PLPP1O14494 284 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 PRODHO43272 600 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 PI15O43692 258 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 ICMTO60725 284 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 GABRA5P31644 462 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 NNMTP40261 264 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 NDUFA9Q16795 377 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 DUSP6Q16828 381 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 SMUG1Q53HV7 270 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 PRAMEF14Q5SWL7 426 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 PRAMEF13Q5VWM6 474 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 AMIGO1Q86WK6 493 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 ANKK1Q8NFD2 765 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 NEIL3Q8TAT5 605 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 PHF21AQ96BD5 680 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 TM4SF18Q96CE8 201 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 SLC38A2Q96QD8 506 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 PRR14Q9BWN1 585 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 PLA2G12AQ9BZM1 189 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 OR51I1Q9H343 314 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 PPP1R3EQ9H7J1 279 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 B3GAT2Q9NPZ5 323 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 P2RX2Q9UBL9 471 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 ASF1AQ9Y294 204 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 SF3B6Q9Y3B4 125 aaKnown RBP11.77□□□□□ -0.53
CAPN1-208ENST00000527323 A0A1W2PRQ8 180 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 CD8B2A6NJW9 211 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 WASHC1A8K0Z3 465 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 B4GALT2O60909 372 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 ASGR2P07307 311 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 CD8BP10966 210 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 IFNA8P32881 189 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 CSTF1Q05048 431 aaKnown RBP11.77□□□□□ -0.53
CAPN1-208ENST00000527323 TMEM31Q5JXX7 168 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 TIGD3Q6B0B8 471 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 SLC27A4Q6P1M0 643 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 ASB18Q6ZVZ8 466 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 ADGRF3Q8IZF5 1079 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 OR8H1Q8NGG4 311 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 OR6T1Q8NGN1 323 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 UPRTQ96BW1 309 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 WDR34Q96EX3 536 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 MED30Q96HR3 178 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 TTYH1Q9H313 450 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-208ENST00000527323 NEUROD4Q9HD90 331 aa11.77□□□□□ -0.53
CAPN1-208ENST00000527323 EXOSC1Q9Y3B2 195 aaKnown RBP11.77□□□□□ -0.53
CAPN1-208ENST00000527323 TMEM129A0AVI4 362 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 IRGMA1A4Y4 181 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 SCAMP1O15126 338 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 ARSBP15848 533 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 PTGER1P34995 402 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 EVX1P49640 407 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 RRAS2P62070 204 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-208ENST00000527323 INSL4Q14641 139 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 KIAA1161Q6NSJ0 714 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 TBC1D19Q8N5T2 526 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 COQ7Q99807 217 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 SLC6A17Q9H1V8 727 aa11.76□□□□□ -0.53
CAPN1-208ENST00000527323 DENND4CQ5VZ89 1909 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms