RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 RACGAP1Q9H0H5 632 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 SP140LQ9H930 580 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 NDUFB11Q9NX14 153 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 KCMF1Q9P0J7 381 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 CAB39Q9Y376 341 aaPredicted RBP16.47■□□□□ 0.23
USH1C-205ENST00000527020 LRP4O75096 1905 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 TRBV23OR9-2A0A075B6M9 112 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 CPSF4LA6NMK7 179 aaKnown RBP16.47■□□□□ 0.23
USH1C-205ENST00000527020 CTDSP2O14595 271 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 KDM1AO60341 852 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 DNAJB6O75190 326 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 EGFP01133 1207 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 ACADMP11310 421 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 GSTM3P21266 225 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 SOX6P35712 828 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 ETV5P41161 510 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 ETV1P50549 477 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 SMSP52788 366 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.47■□□□□ 0.23
USH1C-205ENST00000527020 TGM3Q08188 693 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 MLLT11Q13015 90 aaPredicted RBP16.47■□□□□ 0.23
USH1C-205ENST00000527020 HEPHL1Q6MZM0 1159 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 RD3Q7Z3Z2 195 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 ASPGQ86U10 573 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 TSACCQ96A04 125 aaPredicted RBP16.47■□□□□ 0.23
USH1C-205ENST00000527020 KCNS3Q9BQ31 491 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 ASPNQ9BXN1 380 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 POLR2J2Q9GZM3 115 aaKnown RBP16.47■□□□□ 0.23
USH1C-205ENST00000527020 TMEM74BQ9NUR3 256 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 NTMQ9P121 344 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 LIPT1Q9Y234 373 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 NTNG1Q9Y2I2 539 aa16.47■□□□□ 0.23
USH1C-205ENST00000527020 FAM170BA6NMN3 283 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 P2RX6O15547 441 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 KLF8O95600 359 aaPredicted RBP16.46■□□□□ 0.23
USH1C-205ENST00000527020 SMIM10L1P0DMW3 83 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 SOX18P35713 384 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 HOXC5Q00444 222 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 NFATC4Q14934 902 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 MTSS1LQ765P7 747 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 PHC2Q8IXK0 858 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 SLC16A11Q8NCK7 471 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 GNPDA2Q8TDQ7 276 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 ASB12Q8WXK4 309 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 TM4SF19Q96DZ7 209 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 SMIM10Q96HG1 83 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 SDHCQ99643 169 aaPredicted RBP16.46■□□□□ 0.23
USH1C-205ENST00000527020 SAP130Q9H0E3 1048 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 NKX2-4Q9H2Z4 354 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 EXOSC4Q9NPD3 245 aaKnown RBP16.46■□□□□ 0.23
USH1C-205ENST00000527020 CHCHD3Q9NX63 227 aaKnown RBP16.46■□□□□ 0.23
USH1C-205ENST00000527020 CNIH4Q9P003 139 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 SEC14L4Q9UDX3 406 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 PCOLCE2Q9UKZ9 415 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 CARD8Q9Y2G2 431 aa16.46■□□□□ 0.23
USH1C-205ENST00000527020 SPTBN5Q9NRC6 3674 aaKnown RBP16.46■□□□□ 0.22
USH1C-205ENST00000527020 A0A075B6Q4 140 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 A6NCN8 305 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 ZSCAN9O15535 394 aaPredicted RBP16.45■□□□□ 0.22
USH1C-205ENST00000527020 CTSVO60911 334 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 RAB36O95755 333 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 THY1P04216 161 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 OMPP47874 163 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 TNFRSF17Q02223 184 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 MAP4K2Q12851 820 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 TRAM2Q15035 370 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 SNAPC1Q16533 368 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 ATAT1Q5SQI0 421 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 MFSD12Q6NUT3 480 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 FRRS1Q6ZNA5 592 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 GDPGP1Q6ZNW5 385 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 C16orf62Q7Z3J2 963 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 ZBTB8BQ8NAP8 495 aaPredicted RBP16.45■□□□□ 0.22
USH1C-205ENST00000527020 TMEM163Q8TC26 289 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 ITPKCQ96DU7 683 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 BMFQ96LC9 184 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 OR2A14Q96R47 310 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 OR2A5Q96R48 311 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 NUAK2Q9H093 628 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 TMEM168Q9H0V1 697 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 SRMSQ9H3Y6 488 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 MRPS18AQ9NVS2 196 aaKnown RBP16.45■□□□□ 0.22
USH1C-205ENST00000527020 ZNF229Q9UJW7 825 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 STUB1Q9UNE7 303 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 PCDHGB6Q9Y5F9 930 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 UBXN7O94888 489 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 SPNP16150 400 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 MAGP20916 626 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 NDUFS1P28331 727 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 PRKAR1BP31321 381 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 AVPR1BP47901 424 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 RGS1Q08116 209 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 TSPAN31Q12999 210 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 CBX3Q13185 183 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 LIPKQ5VXJ0 399 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 SDE2Q6IQ49 451 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 RBM12BQ8IXT5 1001 aaKnown RBP16.45■□□□□ 0.22
USH1C-205ENST00000527020 CDS1Q92903 461 aa16.45■□□□□ 0.22
USH1C-205ENST00000527020 FAM46AQ96IP4 442 aaKnown RBP16.45■□□□□ 0.22
USH1C-205ENST00000527020 CPNE5Q9HCH3 593 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms