RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 IL19Q9UHD0 177 aa3.13□□□□□ -1.91
CD44-215ENST00000525241 CLEC4EQ9ULY5 219 aa3.13□□□□□ -1.91
CD44-215ENST00000525241 MOKQ9UQ07 419 aa3.13□□□□□ -1.91
CD44-215ENST00000525241 DHRS7Q9Y394 339 aa3.13□□□□□ -1.91
CD44-215ENST00000525241 TRIM64A6NGJ6 449 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 TRIM64BA6NI03 449 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 FAM220BPB1ANY3 271 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 H3BMH7 237 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 HAT1O14929 419 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 ADAM12O43184 909 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 HTATSF1O43719 755 aaKnown RBP3.12□□□□□ -1.91
CD44-215ENST00000525241 BAG2O95816 211 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 SLC4A1P02730 911 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 P0C879 139 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 RFC2P35250 354 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 ASAH1Q13510 395 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 PARP6Q2NL67 630 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 QRICH1Q2TAL8 776 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 TATDN1Q6P1N9 297 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 PLBD1Q6P4A8 553 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 WDR88Q6ZMY6 472 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 GOLGA7Q7Z5G4 137 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 TAF8Q7Z7C8 310 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 ERICH1Q86X53 443 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 CASD1Q96PB1 797 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 RUFY1Q96T51 708 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 HCAR1Q9BXC0 346 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 FZR1Q9UM11 496 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 KNSTRNQ9Y448 316 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 SPAG9O60271 1321 aaKnown RBP3.12□□□□□ -1.91
CD44-215ENST00000525241 ATRXP46100 2492 aa3.12□□□□□ -1.91
CD44-215ENST00000525241 TRBV7-9A0A0J9YWB2 115 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 IMPA2O14732 288 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 NUDT21O43809 227 aaKnown RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 ZBTB14O43829 449 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 AZU1P20160 251 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 AKT2P31751 481 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 XCR1P46094 333 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 NUMBP49757 651 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 STK19P49842 368 aaPredicted RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 ERVPABLB-1P60509 514 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 LYZP61626 148 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 NOP14P78316 857 aaKnown RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 MYBPC1Q00872 1141 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 EIF2B1Q14232 305 aaKnown RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 KIAA0040Q15053 153 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 IL23RQ5VWK5 629 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 SLC22A10Q63ZE4 541 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 LEG1Q6P5S2 330 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 UBQLNLQ8IYU4 475 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 CENPSQ8N2Z9 138 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 WDR36Q8NI36 951 aaKnown RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 MGARPQ8TDB4 240 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 U2AF1L4Q8WU68 220 aaKnown RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 TMEM186Q96B77 213 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 XPO4Q9C0E2 1151 aaKnown RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 NACA2Q9H009 215 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 RSPH9Q9H1X1 276 aaPredicted RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 OPN3Q9H1Y3 402 aaPredicted RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 MEPEQ9NQ76 525 aaPredicted RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 DCAF13Q9NV06 445 aaKnown RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 ANO10Q9NW15 660 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 BARX2Q9UMQ3 279 aaPredicted RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 ZNF256Q9Y2P7 627 aaPredicted RBP3.11□□□□□ -1.91
CD44-215ENST00000525241 FKBP7Q9Y680 259 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 RPGRIP1LQ68CZ1 1315 aa3.11□□□□□ -1.91
CD44-215ENST00000525241 CFAP73A6NFT4 308 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 E7ENQ6 273 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 ZNF19P17023 458 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 PRDX6P30041 224 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 SFNP31947 248 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 CD47Q08722 323 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 ZP4Q12836 540 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 IL18R1Q13478 541 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 C9orf129Q5T035 196 aaKnown RBP3.1□□□□□ -1.91
CD44-215ENST00000525241 LGSNQ5TDP6 509 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 OR6B2Q6IFH4 312 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 PNCKQ6P2M8 343 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 OLFM4Q6UX06 510 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 HACD2Q6Y1H2 254 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 PAQR9Q6ZVX9 377 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 MIER3Q7Z3K6 550 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 FBXO16Q8IX29 292 aaPredicted RBP3.1□□□□□ -1.91
CD44-215ENST00000525241 CCDC36Q8IYA8 594 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 ARFGAP2Q8N6H7 521 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 CCDC26Q8TAB7 109 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 SLC13A3Q8WWT9 602 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 FAF2Q96CS3 445 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 TEX13BQ9BXU2 312 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 MIEF1Q9NQG6 463 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 CNOT2Q9NZN8 540 aaKnown RBP3.1□□□□□ -1.91
CD44-215ENST00000525241 SLC2A6Q9UGQ3 507 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 IL20RAQ9UHF4 553 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 CELA1Q9UNI1 258 aa3.1□□□□□ -1.91
CD44-215ENST00000525241 FBLL1A6NHQ2 334 aaKnown RBP3.09□□□□□ -1.91
CD44-215ENST00000525241 ARHGAP42A6NI28 874 aa3.09□□□□□ -1.91
CD44-215ENST00000525241 MT-ND3P03897 115 aa3.09□□□□□ -1.91
CD44-215ENST00000525241 SLC35G4P0C7Q5 338 aa3.09□□□□□ -1.91
CD44-215ENST00000525241 IGHV1-2P23083 117 aa3.09□□□□□ -1.91
CD44-215ENST00000525241 ZBTB25P24278 435 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms