RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 UBE2IP63279 158 aaKnown RBP12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 TARDBPQ13148 414 aaKnown RBP eCLIP12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 COL19A1Q14993 1142 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 NDUFA9Q16795 377 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 ZNF181Q2M3W8 571 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 ZNF311Q5JNZ3 666 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 SLX4IPQ5VYV7 408 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 SNX29P2Q8IUI4 249 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 OR6T1Q8NGN1 323 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 SLC7A13Q8TCU3 470 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 PATE1Q8WXA2 126 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 NR4A3Q92570 626 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 PRDM9Q9NQV7 894 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 CYP8B1Q9UNU6 501 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 MTCH2Q9Y6C9 303 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 SZT2Q5T011 3432 aa12.91□□□□□ -0.34
LDLRAD3-202ENST00000524419 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 KIR2DS5A0A0G2JLQ3 304 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 A0A0G2JNG1 304 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 A0A0J9YY10 115 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 C10orf142B7Z368 130 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 H3BQ06 376 aaPredicted RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 KIR2DS3K7RE56 304 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 EPPINO95925 133 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 AGR2O95994 175 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 IGLV3-19P01714 112 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 PIPP12273 146 aaPredicted RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 SNRPGP62308 76 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 CDC20Q12834 499 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 RUNX2Q13950 521 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 KIR2DS5Q14953 304 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 FAM214AQ32MH5 1076 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 C12orf73Q69YU5 71 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 ZNF655Q8N720 491 aaPredicted RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 ADAMTS15Q8TE58 950 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 RSC1A1Q92681 617 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 GIMAP5Q96F15 307 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 ARHGDIGQ99819 225 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 SLC38A1Q9H2H9 487 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 TCEAL2Q9H3H9 227 aaPredicted RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 SP140LQ9H930 580 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 ANKRA2Q9H9E1 313 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 NTMQ9P121 344 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 PAIP2BQ9ULR5 123 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 DAPP1Q9UN19 280 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 NDRG2Q9UN36 371 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 SLC6A14Q9UN76 642 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 IFT52Q9Y366 437 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 LOC105369274A0A096LPK9 316 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 LOC102723532A0A0G2JNH3 316 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 DUXAA6NLW8 204 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 OR5K4A6NMS3 321 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 H0YGG7 62 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 DSCR3O14972 297 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 EIF2S1P05198 315 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 DBTP11182 482 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 ALOX12P18054 663 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 GRK5P34947 590 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 ARF3P61204 181 aaPredicted RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 SNRPNP63162 240 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 SIM1P81133 766 aaPredicted RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 ALDH6A1Q02252 535 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 ZNF45Q02386 682 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 CHRNEQ04844 493 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 TIMM50Q3ZCQ8 353 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 C6orf132Q5T0Z8 1188 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 MFSD12Q6NUT3 480 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 CDC73Q6P1J9 531 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 C19orf48Q6RUI8 117 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 FAM111BQ6SJ93 734 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 CASP12Q6UXS9 341 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 IQCHQ86VS3 1027 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 OR4N4Q8N0Y3 316 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 GJD3Q8N144 294 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 OR7G2Q8NG99 324 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 OR4K5Q8NGD3 323 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 BAHD1Q8TBE0 780 aaPredicted RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 COL26A1Q96A83 441 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 TOE1Q96GM8 510 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 Q96MT0 163 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 QRSL1Q9H0R6 528 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 CACYBPQ9HB71 228 aaKnown RBP12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 LYRM4Q9HD34 91 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 MAN2C1Q9NTJ4 1040 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 NDOR1Q9UHB4 597 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 SLC22A7Q9Y694 548 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 SPACA6W5XKT8 324 aa12.9□□□□□ -0.34
LDLRAD3-202ENST00000524419 SHISA7A6NL88 538 aa12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 TPST2O60704 377 aa12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 PVRP15151 417 aa12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 SLC15A1P46059 708 aa12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 TAS2R41P59536 307 aa12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 PRKCDQ05655 676 aa12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 COX10Q12887 443 aa12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 EIF2B5Q13144 721 aaKnown RBP12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 DNASE1L3Q13609 305 aa12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 INAVAQ3KP66 663 aa12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 PLAG1Q6DJT9 500 aa12.89□□□□□ -0.35
LDLRAD3-202ENST00000524419 CD300LDQ6UXZ3 194 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms