RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 SLC22A16Q86VW1 577 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 SIAH3Q8IW03 269 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 SLC44A2Q8IWA5 706 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-225ENST00000523950 PRR22Q8IZ63 422 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 NUP43Q8NFH3 380 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 OR56A1Q8NGH5 318 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 SFXN5Q8TD22 340 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 DIO2Q92813 273 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 HGDQ93099 445 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 TMCO6Q96DC7 493 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 COL21A1Q96P44 957 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 ZBTB18Q99592 522 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 SIKE1Q9BRV8 207 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 SIRT3Q9NTG7 399 aaPredicted RBP11.54□□□□□ -0.56
VEGFA-225ENST00000523950 ZCCHC3Q9NUD5 404 aaKnown RBP11.54□□□□□ -0.56
VEGFA-225ENST00000523950 PCDHGB4Q9UN71 923 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 OR10H1Q9Y4A9 318 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 GPR45Q9Y5Y3 372 aa11.54□□□□□ -0.56
VEGFA-225ENST00000523950 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 GOLGA8QA0A0J9YX86 632 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 GOLGA8OA6NCC3 632 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 GOLGA8NF8WBI6 632 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 PYCARD-AS1I3L0S3 204 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 TSPAN2O60636 221 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 DIAPH2O60879 1101 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 GLSO94925 669 aaPredicted RBP11.53□□□□□ -0.56
VEGFA-225ENST00000523950 NKX2-2O95096 273 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 IL12BP29460 328 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 MAP3K8P41279 467 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 UQCRFS1P47985 274 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 MRPL19P49406 292 aaKnown RBP11.53□□□□□ -0.56
VEGFA-225ENST00000523950 CORO7P57737 925 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 KCNJ2P63252 427 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 PLGLB1Q02325 96 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 FOXO1Q12778 655 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 MRPL49Q13405 166 aaKnown RBP11.53□□□□□ -0.56
VEGFA-225ENST00000523950 PGS1Q32NB8 556 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 MFSD12Q6NUT3 480 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 SLC30A6Q6NXT4 461 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 PAOXQ6QHF9 649 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 GHDCQ8N2G8 530 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 FAM109AQ8N4B1 249 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 TMBIM1Q969X1 311 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 FAM120BQ96EK7 910 aaKnown RBP11.53□□□□□ -0.56
VEGFA-225ENST00000523950 DTNBP1Q96EV8 351 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 GIMAP5Q96F15 307 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 TMEM41AQ96HV5 264 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 MAGED4Q96JG8 741 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 ZNF597Q96LX8 424 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 DOHHQ9BU89 302 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 CCDC28BQ9BUN5 200 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 ANGPTL4Q9BY76 406 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 TTTY12Q9BZ98 90 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 ZFP64Q9NPA5 681 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 TCF7L2Q9NQB0 619 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 FAM120CQ9NX05 1096 aaKnown RBP11.53□□□□□ -0.56
VEGFA-225ENST00000523950 GIN1Q9NXP7 522 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 QPCTLQ9NXS2 382 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 ZIM2Q9NZV7 527 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 B4GALT7Q9UBV7 327 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 CBLCQ9ULV8 474 aa11.53□□□□□ -0.56
VEGFA-225ENST00000523950 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.53□□□□□ -0.56
VEGFA-225ENST00000523950 A0A0G2JMM0 328 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 PRSS51A0A1B0GVH4 220 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 A0A1W2PPB8 328 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 A0A1W2PRS3 328 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 PINLYPA6NC86 204 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 KIR3DP1A8MWS1 328 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 NPIPA5E9PKD4 350 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 UBDO15205 165 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 CFLARO15519 480 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 ASNA1O43681 348 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 HS6ST1O60243 411 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 UGT2B11O75310 529 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 REM1O75628 298 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 UNC5CO95185 931 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 KCNH1O95259 989 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 C6orf47O95873 294 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 ELAVL4P26378 380 aaKnown RBP11.52□□□□□ -0.57
VEGFA-225ENST00000523950 LCN1P31025 176 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 S100A3P33764 101 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 PIGAP37287 484 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 CASP3P42574 277 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 DNASE1L1P49184 302 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 CCT3P49368 545 aaKnown RBP11.52□□□□□ -0.57
VEGFA-225ENST00000523950 PRKAG1P54619 331 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 WNT3P56703 355 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 PPIAP62937 165 aaKnown RBP11.52□□□□□ -0.57
VEGFA-225ENST00000523950 HBA1P69905 142 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 DECR1Q16698 335 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 RNFT1Q5M7Z0 435 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 EXOSC6Q5RKV6 272 aaKnown RBP11.52□□□□□ -0.57
VEGFA-225ENST00000523950 PRAMEF20Q5VT98 475 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 TMEM198Q66K66 360 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 OR4F3Q6IEY1 312 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 SZRD1Q7Z422 152 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 PACS2Q86VP3 889 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 OR5M3Q8NGP4 307 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 RNF138Q8WVD3 245 aa11.52□□□□□ -0.57
VEGFA-225ENST00000523950 NTNG2Q96CW9 530 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms