RNA–Protein interactions for RNA: ENST00000523908.5

CLINT1-207, Transcript of clathrin interactor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLINT1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-207ENST00000523908 ACTRT3Q9BYD9 372 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 PRDM9Q9NQV7 894 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 KLHL28Q9NXS3 571 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 PLEKHB1Q9UF11 243 aaPredicted RBP18.32■□□□□ 0.52
CLINT1-207ENST00000523908 PLD2O14939 933 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 PRKRAO75569 313 aaKnown RBP18.32■□□□□ 0.52
CLINT1-207ENST00000523908 RPS21P63220 83 aaKnown RBP18.32■□□□□ 0.52
CLINT1-207ENST00000523908 SCN1BQ07699 218 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 KRT33BQ14525 404 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 NDUFA5Q16718 116 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 TMEM53Q6P2H8 277 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 CCDC116Q8IYX3 515 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 SAMD14Q8IZD0 417 aaPredicted RBP18.32■□□□□ 0.52
CLINT1-207ENST00000523908 ANKK1Q8NFD2 765 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 OR8D4Q8NGM9 314 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 ACOT11Q8WXI4 607 aaPredicted RBP18.32■□□□□ 0.52
CLINT1-207ENST00000523908 SFXN1Q9H9B4 322 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 MUTYHQ9UIF7 546 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 KCNK6Q9Y257 313 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 GSTK1Q9Y2Q3 226 aa18.32■□□□□ 0.52
CLINT1-207ENST00000523908 DUXAA6NLW8 204 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 KLF4O43474 513 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 OR5F1O95221 314 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 MAGP20916 626 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 RFX2P48378 723 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 DDI2Q5TDH0 399 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 HDDC3Q8N4P3 179 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 C16orf58Q96GQ5 468 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 ARHGAP9Q9BRR9 750 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 MIXL1Q9H2W2 232 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 EGLN3Q9H6Z9 239 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 POU2F3Q9UKI9 436 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 ZNF780BQ9Y6R6 833 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 C2orf16Q68DN1 1984 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 TRDV1A0A1B0GX56 115 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 GLOD5A6NK44 160 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 RGS13O14921 159 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 CCNKO75909 580 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 CERS1P27544 350 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 PEBP1P30086 187 aaKnown RBP18.31■□□□□ 0.52
CLINT1-207ENST00000523908 HNRNPA0Q13151 305 aaKnown RBP18.31■□□□□ 0.52
CLINT1-207ENST00000523908 ZNF730Q6ZMV8 503 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 ZNF517Q6ZMY9 492 aaPredicted RBP18.31■□□□□ 0.52
CLINT1-207ENST00000523908 NUDT18Q6ZVK8 323 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 NRARPQ7Z6K4 114 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 RAB43Q86YS6 212 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 CACTIN-AS1Q8N1I8 211 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 FBXL6Q8N531 539 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 C12orf76Q8N812 135 aaPredicted RBP18.31■□□□□ 0.52
CLINT1-207ENST00000523908 TM9SF4Q92544 642 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 GAL3ST3Q96A11 431 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 ARMC5Q96C12 935 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 GIMAP5Q96F15 307 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 YIPF4Q9BSR8 244 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 C1QTNF7Q9BXJ2 289 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 PCDH10Q9P2E7 1040 aa18.31■□□□□ 0.52
CLINT1-207ENST00000523908 NUMA1Q14980 2115 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 WASHC1A8K0Z3 465 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 LIMS3P0CW19 117 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 LIMS4P0CW20 117 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 GALP22466 123 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 PTBP1P26599 531 aaKnown RBP eCLIP18.3■□□□□ 0.523e-6■■■□□ 17
CLINT1-207ENST00000523908 ERVK-21P61565 698 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 RPE65Q16518 533 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 AADACL4Q5VUY2 407 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 OLIG3Q7RTU3 272 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 PRICKLE2Q7Z3G6 844 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 OR6F1Q8NGZ6 308 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 ZNF486Q96H40 463 aaPredicted RBP18.3■□□□□ 0.52
CLINT1-207ENST00000523908 SLC22A4Q9H015 551 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 SEMA4GQ9NTN9 838 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 IL20Q9NYY1 176 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 EXOGQ9Y2C4 368 aaKnown RBP18.3■□□□□ 0.52
CLINT1-207ENST00000523908 KCNE3Q9Y6H6 103 aa18.3■□□□□ 0.52
CLINT1-207ENST00000523908 MC3RP41968 323 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 LSM11P83369 360 aaKnown RBP eCLIP18.29■□□□□ 0.52
CLINT1-207ENST00000523908 CHRNEQ04844 493 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 BAK1Q16611 211 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 C2orf27AQ580R0 203 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 C18orf63Q68DL7 685 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 C22orf42Q6IC83 251 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 VITQ6UXI7 678 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 NT5CQ8TCD5 201 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 BADQ92934 168 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 OTUB1Q96FW1 271 aaPredicted RBP18.29■□□□□ 0.52
CLINT1-207ENST00000523908 MS4A4EQ96PG1 132 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 ANKRA2Q9H9E1 313 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 ABCB9Q9NP78 766 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 OR6C2Q9NZP2 312 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 APOBEC3BQ9UH17 382 aaKnown RBP18.29■□□□□ 0.52
CLINT1-207ENST00000523908 ZNF221Q9UK13 617 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 AP3D1O14617 1153 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 CHST10O43529 356 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 SSX4O60224 188 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 IGHA1P01876 353 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 APODP05090 189 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 KRT8P05787 483 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 CCNYL3P0C7X3 344 aa18.29■□□□□ 0.52
CLINT1-207ENST00000523908 GSTT2P0CG29 244 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms