RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PSME3P61289 254 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 RNF4P78317 190 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 MXRA7P84157 204 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 RABL3Q5HYI8 236 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.04□□□□□ -0.64
PVT1-215ENST00000522963 B3GNTL1Q67FW5 361 aaPredicted RBP11.04□□□□□ -0.64
PVT1-215ENST00000522963 FCRLBQ6BAA4 426 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 ANGPTL8Q6UXH0 198 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 HSDL2Q6YN16 418 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 CCDC121Q6ZUS5 278 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 C10orf111Q8N326 155 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 ZADH2Q8N4Q0 377 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 HORMAD2Q8N7B1 307 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 OR52N2Q8NGI0 321 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 MIPOL1Q8TD10 442 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 HOXB13Q92826 284 aaPredicted RBP11.04□□□□□ -0.64
PVT1-215ENST00000522963 SLC7A6OSQ96CW6 309 aaPredicted RBP11.04□□□□□ -0.64
PVT1-215ENST00000522963 OTUB1Q96FW1 271 aaPredicted RBP11.04□□□□□ -0.64
PVT1-215ENST00000522963 GAL3ST4Q96RP7 486 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 HOPXQ9BPY8 73 aaPredicted RBP11.04□□□□□ -0.64
PVT1-215ENST00000522963 LMF2Q9BU23 707 aaKnown RBP11.04□□□□□ -0.64
PVT1-215ENST00000522963 ACTRT3Q9BYD9 372 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 WWTR1Q9GZV5 400 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 LIN28AQ9H9Z2 209 aaKnown RBP11.04□□□□□ -0.64
PVT1-215ENST00000522963 CFL2Q9Y281 166 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 PCDHGB7Q9Y5F8 929 aa11.04□□□□□ -0.64
PVT1-215ENST00000522963 ATMQ13315 3056 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 C2orf92A0A1B0GVN3 265 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 TMEM200CA6NKL6 621 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 EVPLLA8MZ36 301 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 ZFAND5O76080 213 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 F10P00742 488 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 ETFAP13804 333 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 PPIBP23284 216 aaKnown RBP11.03□□□□□ -0.64
PVT1-215ENST00000522963 MAN2A2P49641 1150 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 PRIM2P49643 509 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 ST13P50502 369 aaKnown RBP11.03□□□□□ -0.64
PVT1-215ENST00000522963 SOX8P57073 446 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 CORO7P57737 925 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 RGNQ15493 299 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 CDC73Q6P1J9 531 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 TNFAIP8L2Q6P589 184 aaPredicted RBP11.03□□□□□ -0.64
PVT1-215ENST00000522963 ZCCHC12Q6PEW1 402 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 C16orf89Q6UX73 402 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 ISLR2Q6UXK2 745 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 NPSR1Q6W5P4 371 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 C16orf47Q6ZP98 133 aaPredicted RBP11.03□□□□□ -0.64
PVT1-215ENST00000522963 SLC29A4Q7RTT9 530 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 SLC15A3Q8IY34 581 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 PGAM4Q8N0Y7 254 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 RBMXL3Q8N7X1 1067 aaKnown RBP11.03□□□□□ -0.64
PVT1-215ENST00000522963 ZNF441Q8N8Z8 693 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 CDRT4Q8N9R6 151 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 SLC16A11Q8NCK7 471 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 OR8J3Q8NGG0 315 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 OR5D16Q8NGK9 328 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 OR8K3Q8NH51 312 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 NUBPLQ8TB37 319 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 THAP3Q8WTV1 239 aaPredicted RBP11.03□□□□□ -0.64
PVT1-215ENST00000522963 TM9SF4Q92544 642 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 SLC9A6Q92581 669 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 ADIPOR1Q96A54 375 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 TMEM125Q96AQ2 219 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 THUMPD3Q9BV44 507 aaKnown RBP11.03□□□□□ -0.64
PVT1-215ENST00000522963 DEFB126Q9BYW3 111 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 OR51I1Q9H343 314 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 CMTM6Q9NX76 183 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 TAS2R1Q9NYW7 299 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 PLA2G3Q9NZ20 509 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 ANAPC2Q9UJX6 822 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 FAF1Q9UNN5 650 aaPredicted RBP11.03□□□□□ -0.64
PVT1-215ENST00000522963 GPR55Q9Y2T6 319 aaPredicted RBP11.03□□□□□ -0.64
PVT1-215ENST00000522963 KCNE3Q9Y6H6 103 aa11.03□□□□□ -0.64
PVT1-215ENST00000522963 C15orf38-AP3S2A0A0A6YYH1 394 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 TTLL8A6PVC2 850 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 HMGN4O00479 90 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 SUV39H1O43463 412 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 ATP5HO75947 161 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 NKX2-2O95096 273 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 ALOX5P09917 674 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 CT45A8P0DMV1 189 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 CT45A9P0DMV2 189 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 OR12D1P0DN82 309 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 GPX2P18283 190 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 CRATP43155 626 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 PPICP45877 212 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 CD97P48960 835 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 KHKP50053 298 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 GZMMP51124 257 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 SLC7A2P52569 658 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 AP2B1P63010 937 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 PSG6Q00889 435 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 NNATQ16517 81 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 DUSP5Q16690 384 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 CT45A2Q5DJT8 189 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 CRB2Q5IJ48 1285 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 HLA-DQA1Q5Y7H0 255 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 ARPINQ7Z6K5 226 aa11.02□□□□□ -0.65
PVT1-215ENST00000522963 SLC44A2Q8IWA5 706 aaPredicted RBP11.02□□□□□ -0.65
PVT1-215ENST00000522963 DEFB107AQ8IZN7 70 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms