RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 FANCFQ9NPI8 374 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 LYARQ9NX58 379 aaKnown RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 TEX10Q9NXF1 929 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 TRMT1Q9NXH9 659 aaKnown RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 PACSIN3Q9UKS6 424 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 CHMP2BQ9UQN3 213 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 CFL2Q9Y281 166 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 C15orf41Q9Y2V0 281 aa5.68□□□□□ -1.5
PABPC1-220ENST00000522658 CHCHD2Q9Y6H1 151 aaPredicted RBP5.68□□□□□ -1.5
PABPC1-220ENST00000522658 ZNF407Q9C0G0 2248 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 SUPT3HB4E1H0 165 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 SAP18O00422 153 aaKnown RBP5.67□□□□□ -1.5
PABPC1-220ENST00000522658 RTCAO00442 366 aaKnown RBP5.67□□□□□ -1.5
PABPC1-220ENST00000522658 SUPT3HO75486 399 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 C1QAP02745 245 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 HPNP05981 417 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 POU2F1P14859 743 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 CHMP24386 653 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 PIK3R1P27986 724 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 GDF5P43026 501 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 MAGEA3P43357 314 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 HSPA7P48741 367 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 FNTAP49354 379 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 ARL4CP56559 192 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 FBXW4P57775 412 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 DMTNQ08495 405 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 PLCXD2Q0VAA5 305 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 CHIT1Q13231 466 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 SLAMF1Q13291 335 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 VEZF1Q14119 521 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 DOC2AQ14183 400 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 ZNF460Q14592 562 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 EBPQ15125 230 aaKnown RBP5.67□□□□□ -1.5
PABPC1-220ENST00000522658 TGFBIQ15582 683 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 ACKR1Q16570 336 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 ADPRMQ3LIE5 342 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 OR2A2Q6IF42 318 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 OR52E8Q6IFG1 317 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 SULT1C3Q6IMI6 304 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 LRRC70Q7Z2Q7 622 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 GPR180Q86V85 440 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 NAT8LQ8N9F0 302 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 C9orf106Q8NAJ2 232 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 FAM83FQ8NEG4 500 aaPredicted RBP5.67□□□□□ -1.5
PABPC1-220ENST00000522658 RDH11Q8TC12 318 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 RGMAQ96B86 450 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 PPWD1Q96BP3 646 aaKnown RBP5.67□□□□□ -1.5
PABPC1-220ENST00000522658 RHBDF1Q96CC6 855 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 PDLIM5Q96HC4 596 aaKnown RBP5.67□□□□□ -1.5
PABPC1-220ENST00000522658 TMEM41AQ96HV5 264 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 PBKQ96KB5 322 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 SFXN2Q96NB2 322 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 GNRHR2Q96P88 292 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 WDR83Q9BRX9 315 aaKnown RBP5.67□□□□□ -1.5
PABPC1-220ENST00000522658 MS4A8Q9BY19 250 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 UGT2B28Q9BY64 529 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 PFDN4Q9NQP4 134 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 C6orf203Q9P0P8 240 aaPredicted RBP5.67□□□□□ -1.5
PABPC1-220ENST00000522658 SLC17A6Q9P2U8 582 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 OPTCQ9UBM4 332 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 TRPS1Q9UHF7 1281 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 MAPRE3Q9UPY8 281 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 NPFFR2Q9Y5X5 522 aa5.67□□□□□ -1.5
PABPC1-220ENST00000522658 ARHGAP21Q5T5U3 1957 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 DNAJC13O75165 2243 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 CTAGE15A4D2H0 777 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 TRIM64A6NGJ6 449 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 TRIM64BA6NI03 449 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 GOLGA6L10A6NI86 522 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 DNALI1O14645 258 aaPredicted RBP5.66□□□□□ -1.5
PABPC1-220ENST00000522658 TRIM3O75382 744 aaPredicted RBP5.66□□□□□ -1.5
PABPC1-220ENST00000522658 BANF1O75531 89 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 CNOT4O95628 575 aaKnown RBP5.66□□□□□ -1.5
PABPC1-220ENST00000522658 IGKV3-11P04433 115 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 NT5EP21589 574 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 IL12BP29460 328 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 DEKP35659 375 aaKnown RBP5.66□□□□□ -1.5
PABPC1-220ENST00000522658 SLC6A12P48065 614 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 NEK2P51955 445 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 ATP6V0D1P61421 351 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 MGAT5Q09328 741 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 FGFBP1Q14512 234 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 KCTD19Q17RG1 926 aaPredicted RBP5.66□□□□□ -1.5
PABPC1-220ENST00000522658 EIPR1Q53HC9 387 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 FBXO48Q5FWF7 155 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 NHSL2Q5HYW2 709 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 TEDDM1Q5T9Z0 273 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 RNASEH2BQ5TBB1 312 aaKnown RBP5.66□□□□□ -1.5
PABPC1-220ENST00000522658 KHDRBS2Q5VWX1 349 aaKnown RBP5.66□□□□□ -1.5
PABPC1-220ENST00000522658 VASNQ6EMK4 673 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 OR4C11Q6IEV9 310 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 PODNL1Q6PEZ8 512 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 ZNF793Q6ZN11 406 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 ETV3LQ6ZN32 361 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 SEM1Q6ZVN7 128 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 PLEKHM3Q6ZWE6 761 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 RAPH1Q70E73 1250 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 YRDCQ86U90 279 aaKnown RBP5.66□□□□□ -1.5
PABPC1-220ENST00000522658 CTAGE6Q86UF2 777 aa5.66□□□□□ -1.5
PABPC1-220ENST00000522658 NUDT13Q86X67 352 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms