RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 FAAH2Q6GMR7 532 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 PAPD4Q6PIY7 484 aaKnown RBP12.14□□□□□ -0.47
CPNE3-205ENST00000522240 RNF111Q6ZNA4 994 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 DHFR2Q86XF0 187 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 DTX1Q86Y01 620 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 AQP12AQ8IXF9 295 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 SIMC1Q8NDZ2 872 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 B3GNT7Q8NFL0 401 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 OR5D16Q8NGK9 328 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 OR1N1Q8NGS0 311 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 ADAMTS15Q8TE58 950 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 ZNF721Q8TF20 911 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 C16orf58Q96GQ5 468 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 LPAR4Q99677 370 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 WDR77Q9BQA1 342 aaPredicted RBP12.14□□□□□ -0.47
CPNE3-205ENST00000522240 SEMA4CQ9C0C4 833 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 PIGUQ9H490 435 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 DENND2DQ9H6A0 471 aaPredicted RBP12.14□□□□□ -0.47
CPNE3-205ENST00000522240 GORASP2Q9H8Y8 452 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 EXD2Q9NVH0 621 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 KCND3Q9UK17 655 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 LIPT1Q9Y234 373 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 PCDHGB3Q9Y5G1 929 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 DMXL2Q8TDJ6 3036 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 KNTC1P50748 2209 aa12.14□□□□□ -0.47
CPNE3-205ENST00000522240 A8MUA0 341 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 HRKO00198 91 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 CREG1O75629 220 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 BCHEP06276 602 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 C8BP07358 591 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 TFPTP0C1Z6 253 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 FBXO45P0C2W1 286 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 LIPCP11150 499 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 ATP6V1B2P21281 511 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 MSX2P35548 267 aaPredicted RBP12.13□□□□□ -0.47
CPNE3-205ENST00000522240 DLSTP36957 453 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 CRISP3P54108 245 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 CASP9P55211 416 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 PCBP3P57721 371 aaKnown RBP12.13□□□□□ -0.47
CPNE3-205ENST00000522240 SLC26A5P58743 744 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 DCAF7P61962 342 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 PSPHP78330 225 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 CCNIQ14094 377 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 SSPNQ14714 243 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 MYBPC3Q14896 1274 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 PCOLCEQ15113 449 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 EBPQ15125 230 aaKnown RBP12.13□□□□□ -0.47
CPNE3-205ENST00000522240 DUSP5Q16690 384 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 GLYATQ6IB77 296 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 HEPHL1Q6MZM0 1159 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 REEP3Q6NUK4 255 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 UNQ6494/PRO21346Q6UXR6 183 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 CCDC80Q76M96 950 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 C10orf67Q8IYJ2 551 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 SLC16A11Q8NCK7 471 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 CHDHQ8NE62 594 aaPredicted RBP12.13□□□□□ -0.47
CPNE3-205ENST00000522240 NFAM1Q8NET5 270 aaPredicted RBP12.13□□□□□ -0.47
CPNE3-205ENST00000522240 BHLHE22Q8NFJ8 381 aaPredicted RBP12.13□□□□□ -0.47
CPNE3-205ENST00000522240 C16orf52Q8NHV5 167 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 NFKBIDQ8NI38 313 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 FBXO30Q8TB52 745 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 DOK4Q8TEW6 326 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 FIG4Q92562 907 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 SLC9A6Q92581 669 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 NCLNQ969V3 563 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 VMP1Q96GC9 406 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 TMEM19Q96HH6 336 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 VPS50Q96JG6 964 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 LRGUKQ96M69 825 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 NSMCE2Q96MF7 247 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 RNF145Q96MT1 663 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 BTBD9Q96Q07 612 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 YIPF4Q9BSR8 244 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 OR8D2Q9GZM6 311 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 ZNF700Q9H0M5 742 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 OLAHQ9NV23 265 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 CALML5Q9NZT1 146 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 WASF3Q9UPY6 502 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 HS3ST3B1Q9Y662 390 aa12.13□□□□□ -0.47
CPNE3-205ENST00000522240 IGHV1-45A0A0A0MS14 117 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 LOC101059948A0A1B0GTJ6 334 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 A8MUI8 341 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 C5orf58C9J3I9 102 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 SOCS6O14544 535 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 PDE9AO76083 593 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 GUSBP08236 651 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 COX6A1P12074 109 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 TRHRP34981 398 aaPredicted RBP12.12□□□□□ -0.47
CPNE3-205ENST00000522240 CLCN2P51788 898 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 GPR143P51810 404 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 PSG6Q00889 435 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 FUT5Q11128 374 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 ELOAQ14241 798 aaKnown RBP12.12□□□□□ -0.47
CPNE3-205ENST00000522240 EXT1Q16394 746 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 ARHGAP11BQ3KRB8 267 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 SLC29A4Q7RTT9 530 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 C16orf62Q7Z3J2 963 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 PATL1Q86TB9 770 aaKnown RBP12.12□□□□□ -0.47
CPNE3-205ENST00000522240 EID3Q8N140 333 aa12.12□□□□□ -0.47
CPNE3-205ENST00000522240 COX18Q8N8Q8 333 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms