RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 RTP3Q9BQQ7 232 aa15.36■□□□□ 0.05
USP42-207ENST00000521713 LRRTM2O43300 516 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 DCKP27707 260 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 GDI2P50395 445 aaKnown RBP15.35■□□□□ 0.05
USP42-207ENST00000521713 AIMP2Q13155 320 aaKnown RBP15.35■□□□□ 0.05
USP42-207ENST00000521713 C11orf91Q3C1V1 193 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 TRNP1Q6NT89 227 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 HORMAD2Q8N7B1 307 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 YIPF7Q8N8F6 280 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 OR8J1Q8NGP2 316 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 NEIL3Q8TAT5 605 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 GON7Q9BXV9 100 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 CXCL16Q9H2A7 254 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 SOCS2O14508 198 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 ZNF208O43345 1280 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 PPP1R8Q12972 351 aaKnown RBP15.35■□□□□ 0.05
USP42-207ENST00000521713 CYP27C1Q4G0S4 372 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 GATSQ8NAP1 163 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 CRB3Q9BUF7 120 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 PHF7Q9BWX1 381 aaPredicted RBP15.35■□□□□ 0.05
USP42-207ENST00000521713 PPIL3Q9H2H8 161 aaKnown RBP15.35■□□□□ 0.05
USP42-207ENST00000521713 AP1M2Q9Y6Q5 423 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 CH25HO95992 272 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 PRKACAP17612 351 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 ZMYND11Q15326 602 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 NNATQ16517 81 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 LRIF1Q5T3J3 769 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 NOXA1Q86UR1 476 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 COMMD7Q86VX2 200 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 OR4N5Q8IXE1 308 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 EDAQ92838 391 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 URB1O60287 2271 aaKnown RBP15.35■□□□□ 0.05
USP42-207ENST00000521713 NPIPA2E9PIF3 369 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 NPIPA3F8WFD2 350 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 ACOT7O00154 380 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 AK4P27144 223 aaPredicted RBP15.35■□□□□ 0.05
USP42-207ENST00000521713 FGL2Q14314 439 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 TAZQ16635 292 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 IGFN1Q86VF2 1251 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 CNTN4Q8IWV2 1026 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 TEX26Q8N6G2 289 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 ELSPBP1Q96BH3 223 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 NPLQ9BXD5 320 aaPredicted RBP15.35■□□□□ 0.05
USP42-207ENST00000521713 ABCG5Q9H222 651 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 MYNNQ9NPC7 610 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 NDUFAF4Q9P032 175 aa15.35■□□□□ 0.05
USP42-207ENST00000521713 PRKCDQ05655 676 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 ABHD17BQ5VST6 288 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 FAM198BQ6UWH4 519 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 OR10Q1Q8NGQ4 319 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 DPCDQ9BVM2 203 aaPredicted RBP15.34■□□□□ 0.05
USP42-207ENST00000521713 EMP2P54851 167 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 SPHARQ15513 63 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 UGT8Q16880 541 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 TMEM151BQ8IW70 566 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 SAMD12Q8N8I0 201 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 THEM6Q8WUY1 208 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 PTERQ96BW5 349 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 NAA11Q9BSU3 229 aaPredicted RBP15.34■□□□□ 0.05
USP42-207ENST00000521713 HDAC8Q9BY41 377 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 ZBTB20Q9HC78 741 aaPredicted RBP15.34■□□□□ 0.05
USP42-207ENST00000521713 ENPP5Q9UJA9 477 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 PLEKHA6Q9Y2H5 1048 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 CEPT1Q9Y6K0 416 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 N4BP2Q86UW6 1770 aaPredicted RBP15.34■□□□□ 0.05
USP42-207ENST00000521713 CREBL2O60519 120 aaPredicted RBP15.34■□□□□ 0.05
USP42-207ENST00000521713 ATXN1LP0C7T5 689 aaKnown RBP15.34■□□□□ 0.05
USP42-207ENST00000521713 AOAHP28039 575 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 CCR7P32248 378 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 CTHP32929 405 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 NPRL3Q12980 569 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 LARP4Q71RC2 724 aaKnown RBP eCLIP15.34■□□□□ 0.05
USP42-207ENST00000521713 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.34■□□□□ 0.05
USP42-207ENST00000521713 TCEANCQ8N8B7 351 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 OR52N2Q8NGI0 321 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 ORAI3Q9BRQ5 295 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 CXXC1Q9P0U4 656 aaPredicted RBP15.34■□□□□ 0.05
USP42-207ENST00000521713 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 YKT6O15498 198 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 HOXC11O43248 304 aaPredicted RBP15.34■□□□□ 0.05
USP42-207ENST00000521713 HMGA1P17096 107 aaKnown RBP15.34■□□□□ 0.05
USP42-207ENST00000521713 CHMP24386 653 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 OPRL1P41146 370 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 HTR6P50406 440 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 SLC3A1Q07837 685 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 ARFRP1Q13795 201 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 TMEFF1Q8IYR6 380 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 GAB3Q8WWW8 586 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 ASB15Q8WXK1 588 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 TANKQ92844 425 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 ZNF597Q96LX8 424 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 PIP5K1AQ99755 562 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 ABCD2Q9UBJ2 740 aa15.34■□□□□ 0.05
USP42-207ENST00000521713 BORCS7-ASMTA0A0B4J1R7 106 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 G3V2L1 256 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 T-ENOLP0DO92 83 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 VAMP1P23763 118 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 FOLR3P41439 243 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 SCGB2B2Q4G0G5 96 aa15.33■□□□□ 0.05
USP42-207ENST00000521713 SLC22A10Q63ZE4 541 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms