RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 KRT20P35900 424 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 FAM53BQ14153 422 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 GARNL3Q5VVW2 1013 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 CWF19L1Q69YN2 538 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZCCHC12Q6PEW1 402 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 DEPDC4Q8N2C3 294 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 CTHRC1Q96CG8 243 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 ISOC1Q96CN7 298 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 RBCK1Q9BYM8 510 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 UCK2Q9BZX2 261 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 CCDC90BQ9GZT6 254 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 IRAK4Q9NWZ3 460 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 WDR45Q9Y484 360 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 ABCA7Q8IZY2 2146 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 FAM20BO75063 409 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 NSA2O95478 260 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 CT62P0C5K7 136 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 IDH2P48735 452 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 CSNK2BP67870 215 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 LSAMPQ13449 338 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 TCTE1Q5JU00 501 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 TYW3Q6IPR3 259 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZNF420Q8TAQ5 688 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 SDF2Q99470 211 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 ERVMER34-1Q9H9K5 563 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 CACYBPQ9HB71 228 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 DUSP22Q9NRW4 184 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 KLHL28Q9NXS3 571 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 ERVK-18Q9QC07 812 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 FTSJ1Q9UET6 329 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 CDC14AQ9UNH5 594 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 MRPS33Q9Y291 106 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 IFT52Q9Y366 437 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 CHST2Q9Y4C5 530 aa17.25■□□□□ 0.35
TRAPPC9-210ENST00000521667 LAMA1P25391 3075 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 KNL1Q8NG31 2342 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 BLACEA4D250 179 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 OR10H2O60403 315 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 SEC14L2O76054 403 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 CHMP24386 653 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 DCKP27707 260 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 CRISP1P54107 249 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 UGT2B15P54855 530 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 TUBA3CQ13748 450 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 EXOSC7Q15024 291 aaKnown RBP17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 PTGES3Q15185 160 aaKnown RBP17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 GPR107Q5VW38 600 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 PGBD2Q6P3X8 592 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 PODNL1Q6PEZ8 512 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 P3H2Q8IVL5 708 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZNF540Q8NDQ6 660 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 OR6C4Q8NGE1 309 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 RHOXF1Q8NHV9 184 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 ADAMTS18Q8TE60 1221 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 NR4A3Q92570 626 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 PEX11GQ96HA9 241 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 AHCYL2Q96HN2 611 aaKnown RBP17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 MPP4Q96JB8 637 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 STACQ99469 402 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 CCNB1IP1Q9NPC3 277 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 MAN2C1Q9NTJ4 1040 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 KLHL3Q9UH77 587 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 SATB2Q9UPW6 733 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 GPR55Q9Y2T6 319 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 PCDHGB1Q9Y5G3 927 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 CSNK1G3Q9Y6M4 447 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 CEP192Q8TEP8 1941 aa17.24■□□□□ 0.35
TRAPPC9-210ENST00000521667 NUDT21O43809 227 aaKnown RBP17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 PCMT1P22061 227 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 FNTBP49356 437 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 BNIP3Q12983 259 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 SLC13A2Q13183 592 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 INAVAQ3KP66 663 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 GTF2IRD2BQ6EKJ0 949 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 GTF2IRD2Q86UP8 949 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 PEX5LQ8IYB4 626 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 SLC25A45Q8N413 288 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 LINC00471Q8N535 108 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 DGCR6LQ9BY27 220 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZNF350Q9GZX5 532 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 LHPPQ9H008 270 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZNF443Q9Y2A4 671 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZAR1LA6NP61 321 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 TPST2O60704 377 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 MRPS14O60783 128 aaKnown RBP17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 OSMP13725 252 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 ITIH1P19827 911 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 PCSK6P29122 969 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 OR1D5P58170 312 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 MAT1AQ00266 395 aaKnown RBP17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 TEKQ02763 1124 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 MAP4K2Q12851 820 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 DCST2Q5T1A1 773 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 CCNJQ5T5M9 372 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 DGAT2L6Q6ZPD8 337 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 ZNF595Q8IYB9 648 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 VWA5B2Q8N398 1253 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 COX18Q8N8Q8 333 aa17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 IPCEF1Q8WWN9 437 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC9-210ENST00000521667 MUL1Q969V5 352 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms