RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 RNF212Q495C1 297 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 TATDN1Q6P1N9 297 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 GCNT7Q6ZNI0 430 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 Q8N9G6 341 aaPredicted RBP3.85□□□□□ -1.79
SKP1-208ENST00000521216 C9orf85Q96MD7 179 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 TMEM237Q96Q45 408 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 OR5M11Q96RB7 305 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 TMEM231Q9H6L2 316 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 FAM114A2Q9NRY5 505 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 STARD5Q9NSY2 213 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 GDAP2Q9NXN4 497 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.85□□□□□ -1.791e-6■□□□□ 9.4
SKP1-208ENST00000521216 NTNG1Q9Y2I2 539 aa3.85□□□□□ -1.79
SKP1-208ENST00000521216 FAM168BA1KXE4 195 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.84□□□□□ -1.79
SKP1-208ENST00000521216 PDLIM1O00151 329 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 ADAM12O43184 909 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 GJB5O95377 273 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 POU3F4P49335 361 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 METAP1P53582 386 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 SLC26A5P58743 744 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 PNCKQ6P2M8 343 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 FCGR1BQ92637 280 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 CCDC51Q96ER9 411 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 SIGLEC12Q96PQ1 595 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 CARD6Q9BX69 1037 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 DCAF13Q9NV06 445 aaKnown RBP3.84□□□□□ -1.79
SKP1-208ENST00000521216 SPASTQ9UBP0 616 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 IL20RAQ9UHF4 553 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 DHRS7Q9Y394 339 aa3.84□□□□□ -1.79
SKP1-208ENST00000521216 NPIPA2E9PIF3 369 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 TSC22D2O75157 780 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 RALAP11233 206 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 ETS1P14921 441 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 TSPAN8P19075 237 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 FASP25445 335 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 PTPN4P29074 926 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 PRDX2P32119 198 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 MDH2P40926 338 aaKnown RBP3.83□□□□□ -1.8
SKP1-208ENST00000521216 HERVK_113P63132 956 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 ERVK-8P63133 956 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 CXCL6P80162 114 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 SERTAD2Q14140 314 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 RAB35Q15286 201 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 TGIF1Q15583 401 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 LDLRAP1Q5SW96 308 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 CGB2Q6NT52 195 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 FAM159AQ6UWV7 190 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 HSCBQ8IWL3 235 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 TFB1MQ8WVM0 346 aaKnown RBP3.83□□□□□ -1.8
SKP1-208ENST00000521216 TMEM186Q96B77 213 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 TADA1Q96BN2 335 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 SPXQ9BT56 116 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 ERVK-6Q9BXR3 956 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 ZNF275Q9NSD4 429 aaPredicted RBP3.83□□□□□ -1.8
SKP1-208ENST00000521216 CNOT2Q9NZN8 540 aaKnown RBP3.83□□□□□ -1.8
SKP1-208ENST00000521216 GHRLQ9UBU3 117 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 Q9UF83 564 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 ZNF318Q5VUA4 2279 aa3.83□□□□□ -1.8
SKP1-208ENST00000521216 HAT1O14929 419 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 SLC35G4P0C7Q5 338 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 CHRNA3P32297 505 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 KRTAP10-3P60369 221 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 SNX1Q13596 522 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 ACSF3Q4G176 576 aaPredicted RBP3.82□□□□□ -1.8
SKP1-208ENST00000521216 OLFML2AQ68BL7 652 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 NEK5Q6P3R8 708 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 OLFM4Q6UX06 510 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 PAMR1Q6UXH9 720 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 C2orf66Q6UXQ4 117 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 MCOLN2Q8IZK6 566 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 CNOT6LQ96LI5 555 aaKnown RBP3.82□□□□□ -1.8
SKP1-208ENST00000521216 CASD1Q96PB1 797 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 DEFB126Q9BYW3 111 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 ATG10Q9H0Y0 220 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 SLITRK2Q9H156 845 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 DUS2Q9NX74 493 aaKnown RBP3.82□□□□□ -1.8
SKP1-208ENST00000521216 B4GALT7Q9UBV7 327 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 SLC2A6Q9UGQ3 507 aa3.82□□□□□ -1.8
SKP1-208ENST00000521216 ZNF490Q9ULM2 529 aaPredicted RBP3.82□□□□□ -1.8
SKP1-208ENST00000521216 BARX2Q9UMQ3 279 aaPredicted RBP3.82□□□□□ -1.8
SKP1-208ENST00000521216 IGKV6D-41A0A0C4DH26 115 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 SSX5O60225 188 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 DUSP14O95147 198 aaKnown RBP3.81□□□□□ -1.8
SKP1-208ENST00000521216 ACVR1BP36896 505 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 STK19P49842 368 aaPredicted RBP3.81□□□□□ -1.8
SKP1-208ENST00000521216 IGLV3-21P80748 117 aaPredicted RBP3.81□□□□□ -1.8
SKP1-208ENST00000521216 IL9RQ01113 521 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 IL18R1Q13478 541 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 ASAH1Q13510 395 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 QRICH1Q2TAL8 776 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 LRIT3Q3SXY7 679 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 UTF1Q5T230 341 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 FHL5Q5TD97 284 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 SLX4IPQ5VYV7 408 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 PLBD1Q6P4A8 553 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 ELMOD2Q8IZ81 293 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 KDM8Q8N371 416 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 ARFGAP2Q8N6H7 521 aa3.81□□□□□ -1.8
SKP1-208ENST00000521216 CCDC26Q8TAB7 109 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms