RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 ZNF155Q12901 538 aaPredicted RBP14.17□□□□□ -0.14
LSM1-203ENST00000520755 MFAP5Q13361 173 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 MEP1AQ16819 746 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 ACER2Q5QJU3 275 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 TCTN3Q6NUS6 607 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 C16orf47Q6ZP98 133 aaPredicted RBP14.17□□□□□ -0.14
LSM1-203ENST00000520755 ASB18Q6ZVZ8 466 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 SLC29A4Q7RTT9 530 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 RPS19BP1Q86WX3 136 aaKnown RBP14.17□□□□□ -0.14
LSM1-203ENST00000520755 SLC15A3Q8IY34 581 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 HORMAD2Q8N7B1 307 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 ZNF441Q8N8Z8 693 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 OR8J3Q8NGG0 315 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 OR52N2Q8NGI0 321 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 OR5D16Q8NGK9 328 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 MIPOL1Q8TD10 442 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 WBP1Q96G27 269 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 YIPF4Q9BSR8 244 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 LMF2Q9BU23 707 aaKnown RBP14.17□□□□□ -0.14
LSM1-203ENST00000520755 WWTR1Q9GZV5 400 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 STMN3Q9NZ72 180 aa14.17□□□□□ -0.14
LSM1-203ENST00000520755 OR6C76A6NM76 312 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 WWP2O00308 870 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 ATXN7O15265 892 aaPredicted RBP14.16□□□□□ -0.14
LSM1-203ENST00000520755 BCAS2O75934 225 aaPredicted RBP14.16□□□□□ -0.14
LSM1-203ENST00000520755 NUDT7P0C024 238 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 SFTPCP11686 197 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 ETFAP13804 333 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 GPX2P18283 190 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 GZMMP51124 257 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 MNAT1P51948 309 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 CORO7P57737 925 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 MLF1P58340 268 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 MXRA7P84157 204 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 FUT5Q11128 374 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 RGNQ15493 299 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 NNATQ16517 81 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 ZSCAN26Q16670 478 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 DUSP5Q16690 384 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 CDC73Q6P1J9 531 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 TNFAIP8L2Q6P589 184 aaPredicted RBP14.16□□□□□ -0.14
LSM1-203ENST00000520755 ANGPTL8Q6UXH0 198 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 CCDC121Q6ZUS5 278 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 DEFB107AQ8IZN7 70 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 LGI4Q8N135 537 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 BEST3Q8N1M1 668 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 SLC16A11Q8NCK7 471 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 OR5L2Q8NGL0 311 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 OR8K3Q8NH51 312 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 ADIPOR1Q96A54 375 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 BTBD9Q96Q07 612 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 OR7D2Q96RA2 312 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 LMF1Q96S06 567 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 HOPXQ9BPY8 73 aaPredicted RBP14.16□□□□□ -0.14
LSM1-203ENST00000520755 C1orf21Q9H246 121 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 OR51I1Q9H343 314 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 KAT8Q9H7Z6 458 aaKnown RBP14.16□□□□□ -0.14
LSM1-203ENST00000520755 PLA2G3Q9NZ20 509 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 PACSIN3Q9UKS6 424 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 USP22Q9UPT9 525 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 KCNE3Q9Y6H6 103 aa14.16□□□□□ -0.14
LSM1-203ENST00000520755 C15orf38-AP3S2A0A0A6YYH1 394 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 C2orf92A0A1B0GVN3 265 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 PRAMEF27A3QJZ7 478 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 HMGN4O00479 90 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 TNFRSF21O75509 655 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 ITGA10O75578 1167 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 KRT75O95678 551 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 WDPCPO95876 746 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 CT45A8P0DMV1 189 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 CT45A9P0DMV2 189 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 BMP2P12643 396 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 PPIBP23284 216 aaKnown RBP14.15□□□□□ -0.14
LSM1-203ENST00000520755 ARG2P78540 354 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 MAPK11Q15759 364 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 CT45A2Q5DJT8 189 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 HLA-DQA1Q5Y7H0 255 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 C16orf89Q6UX73 402 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 ARPINQ7Z6K5 226 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 CALHM3Q86XJ0 350 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 CDRT4Q8N9R6 151 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 NUBPLQ8TB37 319 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 TM9SF4Q92544 642 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 ACTRT3Q9BYD9 372 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 NXF5Q9H1B4 397 aaKnown RBP14.15□□□□□ -0.14
LSM1-203ENST00000520755 SLC25A18Q9H1K4 315 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 LRMDAQ9H2I8 198 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 ANKRD10Q9NXR5 420 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 ABI3Q9P2A4 366 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 TMEM181Q9P2C4 612 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 MYOTQ9UBF9 498 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 PRODH2Q9UF12 536 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 CFL2Q9Y281 166 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 PCDHGB7Q9Y5F8 929 aa14.15□□□□□ -0.14
LSM1-203ENST00000520755 ZNF354AO60765 605 aaPredicted RBP14.14□□□□□ -0.15
LSM1-203ENST00000520755 HNRNPCL1O60812 293 aaKnown RBP14.14□□□□□ -0.15
LSM1-203ENST00000520755 OR2J2O76002 312 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 NKX2-2O95096 273 aa14.14□□□□□ -0.15
LSM1-203ENST00000520755 NADKO95544 446 aaPredicted RBP14.14□□□□□ -0.15
LSM1-203ENST00000520755 MATN1P21941 496 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms