RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 UCK1Q9HA47 277 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 TEX10Q9NXF1 929 aaPredicted RBP12.79□□□□□ -0.36
PABPC1-208ENST00000519004 TAS2R3Q9NYW6 316 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 WWOXQ9NZC7 414 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 FLRT1Q9NZU1 646 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 LRFN2Q9ULH4 789 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 MEX3AA1L020 520 aaKnown RBP12.79□□□□□ -0.36
PABPC1-208ENST00000519004 MID1O15344 667 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 PRAF2O60831 178 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 ARIH2O95376 493 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 COX7A2P14406 83 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 TYRP14679 529 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 PRPH2P23942 346 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 STX4Q12846 297 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 KLF9Q13886 244 aaPredicted RBP12.79□□□□□ -0.36
PABPC1-208ENST00000519004 TTLL4Q14679 1199 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 SEC23BQ15437 767 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 CCDC157Q569K6 752 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 TSPAN33Q86UF1 283 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 OR8J2Q8NGG1 315 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 FATE1Q969F0 183 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 PSMG2Q969U7 264 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 KLRG1Q96E93 195 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 TCEAL4Q96EI5 215 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 LRR1Q96L50 414 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 MS4A4EQ96PG1 132 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 EGFL8Q99944 293 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 C7orf50Q9BRJ6 194 aaKnown RBP12.79□□□□□ -0.36
PABPC1-208ENST00000519004 TINF2Q9BSI4 451 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 GOLGA2P5Q9HBQ8 144 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 KCND3Q9UK17 655 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 ENTPD4Q9Y227 616 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 IRAK3Q9Y616 596 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 HMSDA8MTL9 139 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 FFAR1O14842 300 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 IRAK2O43187 625 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 TSPAN3O60637 253 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 CDC123O75794 336 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 AKR7A3O95154 331 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 SERPINA3P01011 423 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 SRPRAP08240 638 aaKnown RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 LAMP1P11279 417 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 CBR1P16152 277 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 AMD1P17707 334 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 FPR3P25089 353 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 GPX4P36969 197 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 VEGFCP49767 419 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 TAF6P49848 677 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 CASP9P55211 416 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 ECH1Q13011 328 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 EOGTQ5NDL2 527 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 COX20Q5RI15 118 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 SLC25A30Q5SVS4 291 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 FAM109BQ6ICB4 259 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 NOXRED1Q6NXP6 359 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 NCEH1Q6PIU2 408 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 ZC3H14Q6PJT7 736 aaKnown RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 NHLRC1Q6VVB1 395 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 SLC44A3Q8N4M1 653 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 GPR156Q8NFN8 814 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 RXFP4Q8TDU9 374 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 ZFPM2Q8WW38 1151 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 KAT2AQ92830 837 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 ORAI1Q96D31 301 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 MNTQ99583 582 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 POLDIP3Q9BY77 421 aaKnown RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 MRPS18AQ9NVS2 196 aaKnown RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 MED11Q9P086 117 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 LHX6Q9UPM6 363 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 AKT3Q9Y243 479 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 OARD1Q9Y530 152 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 A0A1B0GUH1 482 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 MTMR11A4FU01 709 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 ETFAP13804 333 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 EPORP19235 508 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 OPRD1P41143 372 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 ARFIP1P53367 373 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 MAT1AQ00266 395 aaKnown RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 MLLT1Q03111 559 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 LRRN1Q6UXK5 716 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 SVBPQ8N300 66 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 OXR1Q8N573 874 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 THAP4Q8WY91 577 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 GTF3AQ92664 365 aaKnown RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 RNFT2Q96EX2 444 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 APOL5Q9BWW9 433 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 ZNF334Q9HCZ1 680 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 MYOZ2Q9NPC6 264 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 PRMT8Q9NR22 394 aaPredicted RBP12.78□□□□□ -0.36
PABPC1-208ENST00000519004 GPATCH2Q9NW75 528 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 ADAMTS5Q9UNA0 930 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 CORO2BQ9UQ03 480 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 DHRS7Q9Y394 339 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 MCM3APO60318 1980 aa12.78□□□□□ -0.36
PABPC1-208ENST00000519004 A0A1B0GW55 424 aa12.77□□□□□ -0.37
PABPC1-208ENST00000519004 ZNF729A6NN14 1252 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 PRR23D1E9PI22 279 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-208ENST00000519004 HBP1O60381 514 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms