RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 IGKV1-8A0A0C4DH67 115 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 TNFRSF10AO00220 468 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 FAAHO00519 579 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 CTDSP2O14595 271 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 NUDT7P0C024 238 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 UQCRC2P22695 453 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 HOXA6P31267 233 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 HBA1P69905 142 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 C12orf73Q69YU5 71 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 OR4C11Q6IEV9 310 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 ADCK2Q7Z695 626 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 GALNT10Q86SR1 603 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 NANOGP1Q8N7R0 232 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 LCN9Q8WX39 176 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 SLC7A6Q92536 515 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 PDXPQ96GD0 296 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 DHRS1Q96LJ7 313 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 OR5M11Q96RB7 305 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 COQ7Q99807 217 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 TWSG1Q9GZX9 223 aa17.22■□□□□ 0.35
SDC2-202ENST00000518385 FEZF1A0PJY2 475 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 LRIT2A6NDA9 550 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 SNTNA6NMZ2 147 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 ARHGEF9O43307 516 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 LCMT2O60294 686 aaKnown RBP17.21■□□□□ 0.35
SDC2-202ENST00000518385 C6orf47O95873 294 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 TNFP01375 233 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 GBAP04062 536 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 F3P13726 295 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 RFX2P48378 723 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 MC1RQ01726 317 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 COX10Q12887 443 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 KIR2DS3Q14952 304 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 LARS2Q15031 903 aaKnown RBP17.21■□□□□ 0.35
SDC2-202ENST00000518385 TBRG1Q3YBR2 411 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 GLYR1Q49A26 553 aaPredicted RBP17.21■□□□□ 0.35
SDC2-202ENST00000518385 ZNF770Q6IQ21 691 aaPredicted RBP17.21■□□□□ 0.35
SDC2-202ENST00000518385 ZNF425Q6IV72 752 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 SLC36A4Q6YBV0 504 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 Q6ZPB1 254 aaPredicted RBP17.21■□□□□ 0.35
SDC2-202ENST00000518385 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.21■□□□□ 0.35
SDC2-202ENST00000518385 MFSD9Q8NBP5 474 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 AQP11Q8NBQ7 271 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 OR13H1Q8NG92 308 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 SLC25A46Q96AG3 418 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 SLC6A16Q9GZN6 736 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 AMBNQ9NP70 447 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 KLF15Q9UIH9 416 aa17.21■□□□□ 0.35
SDC2-202ENST00000518385 A6NCN8 305 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 OR5K4A6NMS3 321 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 HLA-DQB1P01920 261 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 CHRM5P08912 532 aaPredicted RBP17.2■□□□□ 0.34
SDC2-202ENST00000518385 CKMT1AP12532 417 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 CPN2P22792 545 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 ACTR1BP42025 376 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 FRKP42685 505 aaPredicted RBP17.2■□□□□ 0.34
SDC2-202ENST00000518385 CRYBB2P43320 205 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 NKX2-5P52952 324 aaPredicted RBP17.2■□□□□ 0.34
SDC2-202ENST00000518385 ACTR1AP61163 376 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 CYP4F2P78329 520 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 TGM3Q08188 693 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 ILF3Q12906 894 aaKnown RBP eCLIP17.2■□□□□ 0.348e-7■■■□□ 15
SDC2-202ENST00000518385 MLC1Q15049 377 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 CARTPTQ16568 116 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 DUSP7Q16829 419 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 GPAT3Q53EU6 434 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 YIF1BQ5BJH7 314 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 SLC35F1Q5T1Q4 408 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 DDI2Q5TDH0 399 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 MFSD4BQ5TF39 518 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 KLHL17Q6TDP4 642 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 CASP12Q6UXS9 341 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 CD300LDQ6UXZ3 194 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 FRMD6Q96NE9 622 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 KCNS3Q9BQ31 491 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 FAIM2Q9BWQ8 316 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 NEUROD4Q9HD90 331 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 SLC6A20Q9NP91 592 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 ACSS1Q9NUB1 689 aaPredicted RBP17.2■□□□□ 0.34
SDC2-202ENST00000518385 RLIMQ9NVW2 624 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 ERVK13-1Q9NX77 482 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 TAAR2Q9P1P5 351 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 RAB23Q9ULC3 237 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 DIMT1Q9UNQ2 313 aaKnown RBP17.2■□□□□ 0.34
SDC2-202ENST00000518385 MAU2Q9Y6X3 613 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 PLXND1Q9Y4D7 1925 aa17.2■□□□□ 0.34
SDC2-202ENST00000518385 FAM221BA6H8Z2 402 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 RGS5O15539 181 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 RASGRP1O95267 797 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 CFL1P23528 166 aaKnown RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 CD27P26842 260 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 CNR2P34972 360 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 RPS19P39019 145 aaKnown RBP17.19■□□□□ 0.34
SDC2-202ENST00000518385 SLC9A3P48764 834 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 CAMK2BQ13554 666 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 MPEG1Q2M385 716 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 ALG11Q2TAA5 492 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 KLHL22Q53GT1 634 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 PDZK1Q5T2W1 519 aa17.19■□□□□ 0.34
SDC2-202ENST00000518385 CCNJQ5T5M9 372 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms