RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CDC42P60953 191 aa24.8■■□□□ 1.56
COL13A1-210ENST00000517713 TEKQ02763 1124 aa24.8■■□□□ 1.56
COL13A1-210ENST00000517713 NDUFA9Q16795 377 aa24.8■■□□□ 1.56
COL13A1-210ENST00000517713 TMEM236Q5W0B7 351 aa24.8■■□□□ 1.56
COL13A1-210ENST00000517713 MAN2C1Q9NTJ4 1040 aa24.8■■□□□ 1.56
COL13A1-210ENST00000517713 UCKL1Q9NWZ5 548 aa24.8■■□□□ 1.56
COL13A1-210ENST00000517713 MAT2BQ9NZL9 334 aa24.8■■□□□ 1.56
COL13A1-210ENST00000517713 WDR45Q9Y484 360 aa24.8■■□□□ 1.56
COL13A1-210ENST00000517713 CEP192Q8TEP8 1941 aa24.8■■□□□ 1.56
COL13A1-210ENST00000517713 POU1F1P28069 291 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 CTSKP43235 329 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 CXCL12P48061 93 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 MGAT2Q10469 447 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 TARDBPQ13148 414 aaKnown RBP eCLIP24.79■■□□□ 1.56
COL13A1-210ENST00000517713 C14orf28Q4W4Y0 310 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 AHSA2Q719I0 299 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 PRSS48Q7RTY5 328 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 SVOPQ8N4V2 548 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 LINC00471Q8N535 108 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 GPR55Q9Y2T6 319 aaPredicted RBP24.79■■□□□ 1.56
COL13A1-210ENST00000517713 IFT52Q9Y366 437 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 CHST2Q9Y4C5 530 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 GON4LQ3T8J9 2241 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 MED26O95402 600 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 IFI6P09912 130 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 ALOX5P09917 674 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 MAP2K4P45985 399 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 GP2P55259 537 aaKnown RBP24.79■■□□□ 1.56
COL13A1-210ENST00000517713 SKP1P63208 163 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 ZP2Q05996 745 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 EXOSC6Q5RKV6 272 aaKnown RBP24.79■■□□□ 1.56
COL13A1-210ENST00000517713 TYW3Q6IPR3 259 aaKnown RBP24.79■■□□□ 1.56
COL13A1-210ENST00000517713 TGM7Q96PF1 710 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 SDF2Q99470 211 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 CTPS2Q9NRF8 586 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 KLHL28Q9NXS3 571 aa24.79■■□□□ 1.56
COL13A1-210ENST00000517713 WARS2Q9UGM6 360 aaKnown RBP24.79■■□□□ 1.56
COL13A1-210ENST00000517713 CT62P0C5K7 136 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 MLLT3P42568 568 aaPredicted RBP24.78■■□□□ 1.56
COL13A1-210ENST00000517713 MAPK10P53779 464 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 GFERP55789 205 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 C21orf59P57076 290 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 ILKQ13418 452 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 INAVAQ3KP66 663 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 ZCCHC12Q6PEW1 402 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 CDRT4Q8N9R6 151 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 DNASE2BQ8WZ79 361 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 NR4A3Q92570 626 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 RORBQ92753 470 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 CACYBPQ9HB71 228 aaKnown RBP24.78■■□□□ 1.56
COL13A1-210ENST00000517713 PSORS1C1Q9UIG5 152 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 K7ESF4 209 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 FRS3O43559 492 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 FOXS1O43638 330 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 PIAS2O75928 621 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 DCNP07585 359 aaKnown RBP24.78■■□□□ 1.56
COL13A1-210ENST00000517713 SLC35E2P0CK97 266 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 TAS2R41P59536 307 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 DYNC1I2Q13409 638 aaKnown RBP24.78■■□□□ 1.56
COL13A1-210ENST00000517713 PEX5LQ8IYB4 626 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 CLIP4Q8N3C7 705 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 POLR2J3Q9H1A7 115 aaKnown RBP24.78■■□□□ 1.56
COL13A1-210ENST00000517713 HCN3Q9P1Z3 774 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 ZNF232Q9UNY5 417 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 PLCL2Q9UPR0 1127 aa24.78■■□□□ 1.56
COL13A1-210ENST00000517713 ZNF443Q9Y2A4 671 aaPredicted RBP24.78■■□□□ 1.56
COL13A1-210ENST00000517713 KNL1Q8NG31 2342 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 RHPN2P1A8MT19 583 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 RNH1P13489 461 aaKnown RBP24.77■■□□□ 1.56
COL13A1-210ENST00000517713 CNR2P34972 360 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 GABRA4P48169 554 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 MASP1P48740 699 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 EXOSC7Q15024 291 aaKnown RBP24.77■■□□□ 1.56
COL13A1-210ENST00000517713 OR4K5Q8NGD3 323 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 RAB2BQ8WUD1 216 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 CTHRC1Q96CG8 243 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 SIGLEC11Q96RL6 698 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 COPS4Q9BT78 406 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 PRR14Q9BWN1 585 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 DUSP22Q9NRW4 184 aa24.77■■□□□ 1.56
COL13A1-210ENST00000517713 TLCD2A6NGC4 264 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 TRIM64BA6NI03 449 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 M0R129 80 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 AVPR1BP47901 424 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 MVKQ03426 396 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 CCNJQ5T5M9 372 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 NIPAL1Q6NVV3 410 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 CCDC81Q6ZN84 652 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 MORN4Q8NDC4 146 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 ZNF285Q96NJ3 590 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 STACQ99469 402 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 DCUN1D5Q9BTE7 237 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 RBCK1Q9BYM8 510 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 SOHLH2Q9NX45 425 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 THADAQ6YHU6 1953 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 IGHV5-51A0A0C4DH38 117 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 OR10H2O60403 315 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 MPZL2O60487 215 aa24.76■■□□□ 1.55
COL13A1-210ENST00000517713 FADS2O95864 444 aaKnown RBP24.76■■□□□ 1.55
COL13A1-210ENST00000517713 GUCD1Q96NT3 240 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms