RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 OPN3Q9H1Y3 402 aaPredicted RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 EXOSC3Q9NQT5 275 aaKnown RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 FAM120CQ9NX05 1096 aaKnown RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 GPR83Q9NYM4 423 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 DPM3Q9P2X0 92 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 IL20RAQ9UHF4 553 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 ZNF107Q9UII5 783 aaPredicted RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 TDRD15B5MCY1 1934 aaKnown RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 ABCC9O60706 1549 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 KRT87PA6NCN2 255 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 FAM220BPB1ANY3 271 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.31□□□□□ -2.04
SKP1-203ENST00000517625 K7ERI5 159 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 LGALS8O00214 317 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 SLC17A2O00624 439 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 ALOX15BO15296 676 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 TM9SF1O15321 606 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 WNT2P09544 360 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 H2AFXP16104 143 aaPredicted RBP2.31□□□□□ -2.04
SKP1-203ENST00000517625 DNAJB1P25685 340 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 ARHGDIBP52566 201 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 SLC26A5P58743 744 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 MRPS6P82932 125 aaKnown RBP2.31□□□□□ -2.04
SKP1-203ENST00000517625 SRYQ05066 204 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 GABPB1Q06547 395 aaPredicted RBP2.31□□□□□ -2.04
SKP1-203ENST00000517625 LTB4RQ15722 352 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 DCST2Q5T1A1 773 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 LGSNQ5TDP6 509 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 SEL1L2Q5TEA6 688 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 IRGCQ6NXR0 463 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 ZNF562Q6V9R5 426 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 ADAMTSL5Q6ZMM2 481 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 SYVN1Q86TM6 617 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 HPS6Q86YV9 775 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 ARFGAP2Q8N6H7 521 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 BCORP1Q8N888 145 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 ANKRD20A12PQ8NF67 263 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 OR52J3Q8NH60 311 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 TYMSOSQ8TAI1 123 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 PIWIL1Q96J94 861 aaKnown RBP2.31□□□□□ -2.04
SKP1-203ENST00000517625 FEM1AQ9BSK4 669 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 PAXXQ9BUH6 204 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 RPS10P5Q9NQ39 176 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 DCAF13Q9NV06 445 aaKnown RBP2.31□□□□□ -2.04
SKP1-203ENST00000517625 PRR34Q9NV39 138 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 NINJ2Q9NZG7 142 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 DHRS4-AS1Q9P1J3 65 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 ARMCX1Q9P291 453 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 GHRLQ9UBU3 117 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 CLIP2Q9UDT6 1046 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 EXOSC1Q9Y3B2 195 aaKnown RBP2.31□□□□□ -2.04
SKP1-203ENST00000517625 NAALAD2Q9Y3Q0 740 aa2.31□□□□□ -2.04
SKP1-203ENST00000517625 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.31□□□□□ -2.04
SKP1-203ENST00000517625 FAM230AA0A1W2PPH8 454 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 TTC26A0AVF1 554 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 BICDL2A1A5D9 508 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 RNF222A6NCQ9 220 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 EFCAB7A8K855 629 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 PDXKO00764 312 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 TGFAP01135 160 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 THY1P04216 161 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 BCKDHAP12694 445 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 SDC1P18827 310 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 CCNA2P20248 432 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 PTPN4P29074 926 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 PRDX6P30041 224 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 RFC2P35250 354 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 MAGEA9P43362 315 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 XCR1P46094 333 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 OR1D4P47884 311 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 SLC25A1P53007 311 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 GMFBP60983 142 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 FUT7Q11130 342 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 INAQ16352 499 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 CAMK4Q16566 473 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 BEND6Q5SZJ8 279 aaPredicted RBP2.3□□□□□ -2.04
SKP1-203ENST00000517625 C12orf60Q5U649 245 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 MARC1Q5VT66 337 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 MEDAGQ5VYS4 303 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 RAET1GQ6H3X3 334 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 PAMR1Q6UXH9 720 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 TMEM184AQ6ZMB5 413 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 CCDC36Q8IYA8 594 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 SPAG16Q8N0X2 631 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 KLHL30-AS1Q8NEE0 82 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 MRAPQ8TCY5 172 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 GIPC3Q8TF64 312 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 PPP1R16AQ96I34 528 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 FICDQ9BVA6 458 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 HCAR1Q9BXC0 346 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 ROPN1Q9HAT0 212 aaPredicted RBP2.3□□□□□ -2.04
SKP1-203ENST00000517625 LPAR2Q9HBW0 351 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 ADGRL4Q9HBW9 690 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 TRPV5Q9NQA5 729 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 FAM114A2Q9NRY5 505 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 DUS2Q9NX74 493 aaKnown RBP2.3□□□□□ -2.04
SKP1-203ENST00000517625 EHFQ9NZC4 300 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 RCOR3Q9P2K3 495 aaPredicted RBP2.3□□□□□ -2.04
SKP1-203ENST00000517625 ANKMY1Q9P2S6 941 aa2.3□□□□□ -2.04
SKP1-203ENST00000517625 P2RX2Q9UBL9 471 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms