RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	ENOPH1	Q9UHY7	261 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	KCND3	Q9UK17	655 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	SLC13A4	Q9UKG4	626 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	SH3GLB1	Q9Y371	365 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	PCDHGB2	Q9Y5G2	931 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	LYVE1	Q9Y5Y7	322 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711		U3KQV3	271 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	UNC13C	Q8NB66	2214 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	PRAMEF27	A3QJZ7	478 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	DYRK3	O43781	588 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	PRAMEF2	O60811	474 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	JRK	O75564	520 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	SNAP29	O95721	258 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	THBS1	P07996	1170 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	ACP2	P11117	423 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	ANXA8	P13928	327 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	FOLR1	P15328	257 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	FBL	P22087	321 aa	Known RBP	11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	PTGER1	P34995	402 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	IST1	P53990	364 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	ZNF155	Q12901	538 aa	Predicted RBP	11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	DUSP7	Q16829	419 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	PROX2	Q3B8N5	592 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	TRMT12	Q53H54	448 aa	Known RBP	11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	COLEC12	Q5KU26	742 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	PERM1	Q5SV97	790 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	KDM4D	Q6B0I6	523 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	FAHD1	Q6P587	224 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	PRR23C	Q6ZRP0	262 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	QSOX2	Q6ZRP7	698 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	TTLL10	Q6ZVT0	673 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	USP51	Q70EK9	711 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	ARHGAP22	Q7Z5H3	698 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	TMEM179B	Q7Z7N9	219 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	BPHL	Q86WA6	291 aa	Predicted RBP	11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	PEX5L	Q8IYB4	626 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	TAGAP	Q8N103	731 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	KDF1	Q8NAX2	398 aa	Predicted RBP	11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	PIK3C3	Q8NEB9	887 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	IFI44	Q8TCB0	444 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	GIPC3	Q8TF64	312 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	PHF10	Q8WUB8	498 aa	Known RBP	11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	SLC9A6	Q92581	669 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	CDS1	Q92903	461 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	RIT1	Q92963	219 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	ZNF501	Q96CX3	271 aa	Predicted RBP	11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	RMND5B	Q96G75	393 aa	Predicted RBP	11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	SLC35A4	Q96G79	324 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	DHRS1	Q96LJ7	313 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	LMF2	Q9BU23	707 aa	Known RBP	11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	ALOXE3	Q9BYJ1	711 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	RBCK1	Q9BYM8	510 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	AMBRA1	Q9C0C7	1298 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	ZNF350	Q9GZX5	532 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	TOR3A	Q9H497	397 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	CXorf21	Q9HAI6	301 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	ZNF304	Q9HCX3	659 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	FSCN3	Q9NQT6	498 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	FGF21	Q9NSA1	209 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	NDOR1	Q9UHB4	597 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	WDR45	Q9Y484	360 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	TESMIN	Q9Y4I5	508 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	RP1	P56715	2156 aa		11.15	□□□□□ -0.62
LMNA-224	ENST00000515711	KNL1	Q8NG31	2342 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711		A0A1W2PQM1	296 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	TAF4	O00268	1085 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	UGT2B11	O75310	529 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	STX11	O75558	287 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	DIRAS1	O95057	198 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	GADD45G	O95257	159 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	OXSR1	O95747	527 aa	Predicted RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	CBX7	O95931	251 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	LGI1	O95970	557 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	HBQ1	P09105	142 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MYF5	P13349	255 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	IFNA8	P32881	189 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MPL	P40238	635 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MAP3K8	P41279	467 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	OR1E2	P47887	323 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	GTF2A1	P52655	376 aa	Predicted RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	HMGA2	P52926	109 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	CDH12	P55289	794 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	TPD52	P55327	224 aa	Predicted RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	POU6F2	P78424	691 aa	Predicted RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	CCL7	P80098	99 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MAT1A	Q00266	395 aa	Known RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	MGAT2	Q10469	447 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	TRA2A	Q13595	282 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	LARS2	Q15031	903 aa	Known RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	DUSP5	Q16690	384 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	KCTD21	Q4G0X4	260 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	ZNF311	Q5JNZ3	666 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	DCST2	Q5T1A1	773 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	TSEN54	Q7Z6J9	526 aa	Known RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	HS3ST5	Q8IZT8	346 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	ZNF619	Q8N2I2	560 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	LINC00471	Q8N535	108 aa		11.14	□□□□□ -0.63
LMNA-224	ENST00000515711	COX18	Q8N8Q8	333 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms