RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 MAP3K8P41279 467 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 ST13P50502 369 aaKnown RBP10.97□□□□□ -0.65
SNF8-215ENST00000515572 MRPS22P82650 360 aaKnown RBP10.97□□□□□ -0.65
SNF8-215ENST00000515572 PLCXD2Q0VAA5 305 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 TP53BP2Q13625 1128 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 LASP1Q14847 261 aaKnown RBP10.97□□□□□ -0.65
SNF8-215ENST00000515572 AGKQ53H12 422 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 CDC73Q6P1J9 531 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 NPSR1Q6W5P4 371 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 NUP54Q7Z3B4 507 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 ZNF227Q86WZ6 799 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 ZNF843Q8N446 348 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 PSD4Q8NDX1 1056 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 OMA1Q96E52 524 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 SPDL1Q96EA4 605 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 SLC35A4Q96G79 324 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 SECISBP2Q96T21 854 aaKnown RBP10.97□□□□□ -0.65
SNF8-215ENST00000515572 STACQ99469 402 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 ELAC2Q9BQ52 826 aaKnown RBP10.97□□□□□ -0.65
SNF8-215ENST00000515572 ACTRT3Q9BYD9 372 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 TRIM4Q9C037 500 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 FAM107BQ9H098 131 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 PCDHGB3Q9Y5G1 929 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 EML6Q6ZMW3 1958 aa10.97□□□□□ -0.65
SNF8-215ENST00000515572 A0A1W2PP18 115 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 OR6C70A6NIJ9 312 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 DUXAA6NLW8 204 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 KLRC4-KLRK1H3BQV0 150 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 SLC22A2O15244 555 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 SNX3O60493 162 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 CCDC22O60826 627 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 NME6O75414 186 aaPredicted RBP10.96□□□□□ -0.65
SNF8-215ENST00000515572 REM1O75628 298 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 C1QL1O75973 258 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 KCNH1O95259 989 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 RASAL1O95294 804 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 ANP32DO95626 131 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 PRB1P04280 392 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 P04436 131 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 IL12BP29460 328 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 GABRA3P34903 492 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 CHI3L1P36222 383 aaPredicted RBP10.96□□□□□ -0.65
SNF8-215ENST00000515572 MAGEA8P43361 318 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 TRPC1P48995 793 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 PNLIPRP2P54317 469 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 PSMD4P55036 377 aaKnown RBP10.96□□□□□ -0.65
SNF8-215ENST00000515572 TXNL4AP83876 142 aaKnown RBP10.96□□□□□ -0.65
SNF8-215ENST00000515572 C19orf57Q0VDD7 668 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 SF3A3Q12874 501 aaKnown RBP eCLIP10.96□□□□□ -0.651e-7■□□□□ 10.6
SNF8-215ENST00000515572 EFR3AQ14156 821 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 DECR1Q16698 335 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 TBCELQ5QJ74 424 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 EXOSC6Q5RKV6 272 aaKnown RBP10.96□□□□□ -0.65
SNF8-215ENST00000515572 SLC22A10Q63ZE4 541 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 ZNF621Q6ZSS3 439 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 C6orf120Q7Z4R8 191 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 MDGA2Q7Z553 956 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 PRR22Q8IZ63 422 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 SLC16A11Q8NCK7 471 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 FAM13CQ8NE31 585 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 OR10G3Q8NGC4 313 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 OR5AK3PQ8NH89 298 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 DNAJB8Q8NHS0 232 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 GPR151Q8TDV0 419 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 PAQR8Q8TEZ7 354 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 SLC9A6Q92581 669 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 JADE3Q92613 823 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 TMBIM1Q969X1 311 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 VPS33AQ96AX1 596 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 NEURL3Q96EH8 262 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 COL21A1Q96P44 957 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 SLC35A5Q9BS91 424 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 INPP5KQ9BT40 448 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 PIGUQ9H490 435 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 SH2D2AQ9NP31 389 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 SERHLQ9NQF3 203 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 SAR1AQ9NR31 198 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 KLHL1Q9NR64 748 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 DUSP22Q9NRW4 184 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 SACM1LQ9NTJ5 587 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 GPATCH2Q9NW75 528 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 LUZP4Q9P127 313 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 RALYQ9UKM9 306 aaKnown RBP10.96□□□□□ -0.65
SNF8-215ENST00000515572 CBLCQ9ULV8 474 aa10.96□□□□□ -0.65
SNF8-215ENST00000515572 CHCHD2Q9Y6H1 151 aaPredicted RBP10.96□□□□□ -0.65
SNF8-215ENST00000515572 ANKRD33BA6NCL7 494 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 TTLL8A6PVC2 850 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 ASNA1O43681 348 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 TSPAN2O60636 221 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 KRT75O95678 551 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 AGR2O95994 175 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 SNRPB2P08579 225 aaKnown RBP10.95□□□□□ -0.66
SNF8-215ENST00000515572 ACP2P11117 423 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 CAPN3P20807 821 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 CNR1P21554 472 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 PIGAP37287 484 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 CDKN2CP42773 168 aa10.95□□□□□ -0.66
SNF8-215ENST00000515572 ANXA11P50995 505 aaKnown RBP10.95□□□□□ -0.66
SNF8-215ENST00000515572 FBXW4P57775 412 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms