RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 AURKBQ96GD4 344 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 C16orf58Q96GQ5 468 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 LCORQ96JN0 433 aaPredicted RBP11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 ITPAQ9BY32 194 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 IKZF5Q9H5V7 419 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 TMEM38AQ9H6F2 299 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 IL1RL2Q9HB29 575 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 SPAG4Q9NPE6 437 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 TMEM181Q9P2C4 612 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 MYOTQ9UBF9 498 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 LIPT1Q9Y234 373 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 DTX4Q9Y2E6 619 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 KCNMB2Q9Y691 235 aa11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 HELZ2Q9BYK8 2649 aaKnown RBP11.09□□□□□ -0.63
PDLIM5-220ENST00000514830 HMGN4O00479 90 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 PRKNO60260 465 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 ALOX5P09917 674 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 PRKAR1AP10644 381 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 ACP2P11117 423 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 LCN1P31025 176 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 TRHRP34981 398 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 SOX11P35716 441 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 GZMMP51124 257 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 EEFSECP57772 596 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 MLF1P58340 268 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 RBBP4Q09028 425 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 ZNF155Q12901 538 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 CAPRIN1Q14444 709 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 DUSP5Q16690 384 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 DNAL1Q4LDG9 190 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 PIGGQ5H8A4 983 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 PRAMEF8Q5VWM4 474 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 PRAMEF7Q5VXH5 474 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 HLA-DQA1Q5Y7H0 255 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 NPSR1Q6W5P4 371 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 BNC2Q6ZN30 1099 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 RINLQ6ZS11 566 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 DND1Q8IYX4 353 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 CLEC4FQ8N1N0 589 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 GALNT16Q8N428 558 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 KIF2BQ8N4N8 673 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC5A8Q8N695 610 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 HORMAD2Q8N7B1 307 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 ADAMTS15Q8TE58 950 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 DOK4Q8TEW6 326 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 OIT3Q8WWZ8 545 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 PMM1Q92871 262 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC35A4Q96G79 324 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 MAGED4Q96JG8 741 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 ZNF354BQ96LW1 612 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 OR7D2Q96RA2 312 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC39A3Q9BRY0 314 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 BTBD10Q9BSF8 475 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 THUMPD3Q9BV44 507 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 BTBD2Q9BX70 525 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 ING2Q9H160 280 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 NXF5Q9H1B4 397 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 OR51I1Q9H343 314 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 Q9N2J8 555 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 A4GALTQ9NPC4 353 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 POLE3Q9NRF9 147 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 CMTM6Q9NX76 183 aa11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 PRPF19Q9UMS4 504 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-220ENST00000514830 ARGFXA6NJG6 315 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 NADKO95544 446 aaPredicted RBP11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 C1QCP02747 245 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 ITGB2P05107 769 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 CELA2AP08217 269 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 HSD17B1P14061 328 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 PIGAP37287 484 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 CRATP43155 626 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC7A2P52569 658 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 CORO7P57737 925 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 MTPNP58546 118 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 DSTNP60981 165 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 MXRA7P84157 204 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC25A3Q00325 362 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 SELPLGQ14242 412 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 GNA13Q14344 377 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 ADRM1Q16186 407 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 FXNQ16595 210 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 ARHGAP11BQ3KRB8 267 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 RABL3Q5HYI8 236 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 CRB2Q5IJ48 1285 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 COX20Q5RI15 118 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 TCTN3Q6NUS6 607 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 ERICH5Q6P6B1 374 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 SZRD1Q7Z422 152 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 ZNF605Q86T29 641 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 RPS19BP1Q86WX3 136 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 SLC30A8Q8IWU4 369 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 TAGAPQ8N103 731 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 THOC3Q96J01 351 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 ZNF583Q96ND8 569 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 TRNT1Q96Q11 434 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 RNF32Q9H0A6 362 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 LRMDAQ9H2I8 198 aa11.07□□□□□ -0.64
PDLIM5-220ENST00000514830 TRIM45Q9H8W5 580 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms