RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TRIM7Q9C029 511 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 ISCUQ9H1K1 167 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 NECTIN3Q9NQS3 549 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 ALKBH4Q9NXW9 302 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 SELENONQ9NZV5 590 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 DNAJB11Q9UBS4 358 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 LCMT1Q9UIC8 334 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 PPIEQ9UNP9 301 aaKnown RBP3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 USP22Q9UPT9 525 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 ERVK-11Q9UQG0 969 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 TENM1Q9UKZ4 2725 aa3.33□□□□□ -1.88
PDLIM5-218ENST00000513341 RAI1Q7Z5J4 1906 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 EML6Q6ZMW3 1958 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 CCDC189A1A4V9 331 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 LRRD1A4D1F6 860 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SYNDIG1LA6NDD5 238 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ARHGEF33A8MVX0 844 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 A8MXE2 369 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 BUD23O43709 281 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 CCNT2O60583 730 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 COQ9O75208 318 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ANXA9O76027 345 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ZFAND5O76080 213 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 CCNDBP1O95273 360 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 TPM2P07951 284 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 IL6RP08887 468 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 NPSP0C0P6 89 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PSG1P11464 419 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 EZRP15311 586 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 EGR1P18146 543 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 CRYGSP22914 178 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 JAK1P23458 1154 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 KDELR1P24390 212 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 HRH2P25021 359 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 HSD17B2P37059 387 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PPARGP37231 505 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 LIPAP38571 399 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PRKCIP41743 596 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 MAGEA5P43359 124 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SSR4P51571 173 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ZNF136P52737 540 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 MTTPP55157 894 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ADARP55265 1226 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ATP5J2P56134 94 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SKP1P63208 163 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ABATP80404 500 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 TIAL1Q01085 375 aaKnown RBP eCLIP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 RHAGQ02094 409 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 MSLNQ13421 630 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 GAB1Q13480 694 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PMS2P11Q13670 270 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PTPRCAPQ14761 206 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ARHGAP19Q14CB8 494 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ABRAXAS2Q15018 415 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SYT16Q17RD7 645 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 CLEC12BQ2HXU8 276 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 HKDC1Q2TB90 917 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 P3H1Q32P28 736 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SYTL3Q4VX76 610 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 CCDC38Q502W7 563 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 TCP11X2Q5H9J9 407 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 MFSD4BQ5TF39 518 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 GFI1BQ5VTD9 330 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 NSUN5P2Q63ZY6 315 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PACS1Q6VY07 963 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 C12orf54Q6X4T0 127 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 DNM1P46Q6ZS02 220 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SH2D5Q6ZV89 423 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ABHD13Q7L211 337 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PID1Q7Z2X4 250 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 MEX3DQ86XN8 651 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PM20D2Q8IYS1 436 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SLC25A41Q8N5S1 370 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PLD5Q8N7P1 536 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ZNF611Q8N823 705 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 NAXEQ8NCW5 288 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 NFAM1Q8NET5 270 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 VPS37AQ8NEZ2 397 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 B3GNT7Q8NFL0 401 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 TNIP2Q8NFZ5 429 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 NEK11Q8NG66 645 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 MBD3L2Q8NHZ7 208 aaPredicted RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 NEIL3Q8TAT5 605 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 NAT14Q8WUY8 206 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ZFAND2BQ8WV99 257 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SLCO2A1Q92959 643 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 LRRC45Q96CN5 670 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 TMEM41AQ96HV5 264 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SPATA13Q96N96 652 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 QRFPRQ96P65 431 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 OLFM3Q96PB7 478 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PANX2Q96RD6 677 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SNX18Q96RF0 628 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 MAK16Q9BXY0 300 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ANGPTL4Q9BY76 406 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 SHARPINQ9H0F6 387 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 PIGMQ9H3S5 423 aa3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 ESRP2Q9H6T0 727 aaKnown RBP3.32□□□□□ -1.88
PDLIM5-218ENST00000513341 CALHM2Q9HA72 323 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms