RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 EIF3LQ9Y262 564 aaKnown RBP11.43□□□□□ -0.58
VEGFA-216ENST00000512683 GPR55Q9Y2T6 319 aaPredicted RBP11.43□□□□□ -0.58
VEGFA-216ENST00000512683 SH3D21A4FU49 640 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 PRAMEF25A6NGN4 478 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 FRG2CA6NGY1 282 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 KDM4EB2RXH2 506 aaPredicted RBP11.42□□□□□ -0.58
VEGFA-216ENST00000512683 DLX3O60479 287 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 OR4F21O95013 312 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 PDYNP01213 254 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 HSD3B1P14060 373 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 CD53P19397 219 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 HSD3B2P26439 372 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 PTGDSP41222 190 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 EMDP50402 254 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 HMGCS1Q01581 520 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 OCRLQ01968 901 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 PLCXD2Q0VAA5 305 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 GALNT1Q10472 559 aaPredicted RBP11.42□□□□□ -0.58
VEGFA-216ENST00000512683 FGFBP1Q14512 234 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 SLC29A2Q14542 456 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 UNC50Q53HI1 259 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 TEX35Q5T0J7 233 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 LGSNQ5TDP6 509 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 COMMD6Q7Z4G1 85 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 PRR22Q8IZ63 422 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 WDSUB1Q8N9V3 476 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 MZB1Q8WU39 189 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 MTBPQ96DY7 904 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 ZNF681Q96N22 645 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 COL21A1Q96P44 957 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 NODALQ96S42 347 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 RHOXF2Q9BQY4 288 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 BRINP2Q9C0B6 783 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 PACSIN3Q9UKS6 424 aa11.42□□□□□ -0.58
VEGFA-216ENST00000512683 H0Y3Z8 333 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 UGT2B11O75310 529 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 ERAL1O75616 437 aaKnown RBP11.41□□□□□ -0.58
VEGFA-216ENST00000512683 CBX7O95931 251 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 INHBBP09529 407 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 FEN1P39748 380 aaKnown RBP11.41□□□□□ -0.58
VEGFA-216ENST00000512683 MC3RP41968 323 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 GSTM5P46439 218 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 SLCO1A2P46721 670 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 CPA2P48052 419 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 AGFG1P52594 562 aaKnown RBP11.41□□□□□ -0.58
VEGFA-216ENST00000512683 PNLIPRP2P54317 469 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 WNT3P56703 355 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 NKX6-1P78426 367 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-216ENST00000512683 CLCQ05315 142 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 LTBQ06643 244 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 TCHHL1Q5QJ38 904 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-216ENST00000512683 ZNF678Q5SXM1 525 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 DCST1Q5T197 706 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 FAM111BQ6SJ93 734 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 CHMP1BQ7LBR1 199 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 LCA5Q86VQ0 697 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 IFNEQ86WN2 208 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 MMP21Q8N119 569 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 OR52R1Q8NGF1 315 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 RNF138Q8WVD3 245 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 SELENOMQ8WWX9 145 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 BTBD9Q96Q07 612 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 TMEM237Q96Q45 408 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 HBEGFQ99075 208 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 ITPAQ9BY32 194 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 STMN4Q9H169 189 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-216ENST00000512683 GSX1Q9H4S2 264 aaPredicted RBP11.41□□□□□ -0.58
VEGFA-216ENST00000512683 HHATLQ9HCP6 504 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 SDHAF3Q9NRP4 125 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 GALNT8Q9NY28 637 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 ELOVL5Q9NYP7 299 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 ZNF226Q9NYT6 803 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 CLCF1Q9UBD9 225 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 VPS29Q9UBQ0 182 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 TRPS1Q9UHF7 1281 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 SLC12A4Q9UP95 1085 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 PLLPQ9Y342 182 aa11.41□□□□□ -0.58
VEGFA-216ENST00000512683 ZNF469Q96JG9 3925 aaPredicted RBP11.4□□□□□ -0.58
VEGFA-216ENST00000512683 GOLGA8RI6L899 631 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 PLOD2O00469 737 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 HCRTR2O43614 444 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 REM1O75628 298 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 SUPT7LO94864 414 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 SLITRK5O94991 958 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 KRT6AP02538 564 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 KRT6BP04259 564 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 PEPDP12955 493 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 ZNF708P17019 499 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 IMPDH1P20839 514 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 FPR1P21462 350 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 ADSLP30566 484 aaPredicted RBP11.4□□□□□ -0.58
VEGFA-216ENST00000512683 SOX18P35713 384 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 KRT20P35900 424 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 KRT6CP48668 564 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 LHX2P50458 406 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 FOXF2Q12947 444 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 GLYR1Q49A26 553 aaPredicted RBP11.4□□□□□ -0.58
VEGFA-216ENST00000512683 TRMT12Q53H54 448 aaKnown RBP11.4□□□□□ -0.58
VEGFA-216ENST00000512683 GSPT2Q8IYD1 628 aaKnown RBP11.4□□□□□ -0.58
VEGFA-216ENST00000512683 CDYL2Q8N8U2 506 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms