RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 RPF2Q9H7B2 306 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 COPS7BQ9H9Q2 264 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 FANCEQ9HB96 536 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 SLC35C2Q9NQQ7 365 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 TEX10Q9NXF1 929 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 NKX1-2Q9UD57 310 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 PACSIN3Q9UKS6 424 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 PLCL2Q9UPR0 1127 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 AP4S1Q9Y587 144 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 RTTNQ86VV8 2226 aa9.76□□□□□ -0.85
PDLIM5-217ENST00000512274 A0A0J9YVX5 310 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 A0A1W2PR48 441 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 DHRS12A0PJE2 317 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 SYNDIG1LA6NDD5 238 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 SLC9B1P1A6NJY1 282 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 H3BMH7 237 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 HCRTR1O43613 425 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 B3GALT2O43825 422 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 TNFRSF21O75509 655 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 AIFM1O95831 613 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 CTSBP07858 339 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 NR2F6P10588 404 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 PSMA4P25789 261 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 MST1P26927 711 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 CERS1P27544 350 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 TLX1P31314 330 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 PCGF2P35227 344 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 VHLP40337 213 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 PTDSS1P48651 473 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 OR4D2P58180 307 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 BIKQ13323 160 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 GAB1Q13480 694 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 RGNQ15493 299 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 ADRM1Q16186 407 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 C3AR1Q16581 482 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 NDUFA9Q16795 377 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 VMACQ2NL98 169 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 MUM1Q2TAK8 710 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 DEFB110Q30KQ9 67 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 GTDC1Q4AE62 458 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 C1orf189Q5VU69 101 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 SAXO2Q658L1 398 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 GLYATQ6IB77 296 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 OR52E8Q6IFG1 317 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 FRMPD2BQ6IN97 320 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 BHLHB9Q6PI77 547 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 IGFL2Q6UWQ7 119 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 RNF111Q6ZNA4 994 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 CCDC80Q76M96 950 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 PPP1R32Q7Z5V6 425 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 TMEM200AQ86VY9 491 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 MCATQ8IVS2 390 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 ADGRG5Q8IZF4 528 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 CLECL1Q8IZS7 167 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 KCT2Q8NC54 265 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 FAM156AQ8NDB6 213 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 ADCY4Q8NFM4 1077 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 OR4A15Q8NGL6 344 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 OR10A6Q8NH74 314 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 FAM120BQ96EK7 910 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 RSRC1Q96IZ7 334 aaKnown RBP9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 NSMCE2Q96MF7 247 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 ZNF681Q96N22 645 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 ENKD1Q9H0I2 346 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 SEC14L3Q9UDX4 400 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 RIMS3Q9UJD0 308 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 TINAGQ9UJW2 476 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 RPH3AQ9Y2J0 694 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 SPACA6W5XKT8 324 aa9.75□□□□□ -0.85
PDLIM5-217ENST00000512274 LOC105369274A0A096LPK9 316 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 LOC102723532A0A0G2JNH3 316 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 PLOD2O00469 737 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 ZNF749O43361 778 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 SH3BGRLO75368 114 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 GMNNO75496 209 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 WISP2O76076 250 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 SOX30O94993 753 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 NSA2O95478 260 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 C6orf47O95873 294 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 GBAP04062 536 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 SERPIND1P05546 499 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 ZNF888P0CJ79 500 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 TCN1P20061 433 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 IL10P22301 178 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 PPP2R1BP30154 601 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 NTSP30990 170 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 CASP6P55212 293 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 LIM2P55344 173 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 MRPS22P82650 360 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 EEF1A2Q05639 463 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 PRSS53Q2L4Q9 553 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 OGFRL1Q5TC84 451 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 AP1ARQ63HQ0 302 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 RPUSD3Q6P087 351 aaKnown RBP9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 LRRC74BQ6ZQY2 392 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 ZNF621Q6ZSS3 439 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 ZNF551Q7Z340 670 aaPredicted RBP9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 SPATA24Q86W54 205 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 ANKRD46Q86W74 232 aa9.74□□□□□ -0.85
PDLIM5-217ENST00000512274 PTOV1Q86YD1 416 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms