RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 JADE3Q92613 823 aa11.85□□□□□ -0.51
COL6A6-203ENST00000511332 HOXB13Q92826 284 aaPredicted RBP11.85□□□□□ -0.51
COL6A6-203ENST00000511332 GIMAP5Q96F15 307 aa11.85□□□□□ -0.51
COL6A6-203ENST00000511332 PANX1Q96RD7 426 aa11.85□□□□□ -0.51
COL6A6-203ENST00000511332 SECISBP2Q96T21 854 aaKnown RBP11.85□□□□□ -0.51
COL6A6-203ENST00000511332 SACM1LQ9NTJ5 587 aa11.85□□□□□ -0.51
COL6A6-203ENST00000511332 CNIH4Q9P003 139 aa11.85□□□□□ -0.51
COL6A6-203ENST00000511332 VPS4AQ9UN37 437 aa11.85□□□□□ -0.51
COL6A6-203ENST00000511332 FAF1Q9UNN5 650 aaPredicted RBP11.85□□□□□ -0.51
COL6A6-203ENST00000511332 SPENQ96T58 3664 aaKnown RBP11.84□□□□□ -0.51
COL6A6-203ENST00000511332 OR6C70A6NIJ9 312 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 NR5A2O00482 541 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 SLC28A2O43868 658 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 KCNH1O95259 989 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 CPSF4O95639 269 aaKnown RBP11.84□□□□□ -0.51
COL6A6-203ENST00000511332 CRYABP02511 175 aaKnown RBP11.84□□□□□ -0.51
COL6A6-203ENST00000511332 HMGN2P05204 90 aaKnown RBP11.84□□□□□ -0.51
COL6A6-203ENST00000511332 ALOX5P09917 674 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 UQCRC2P22695 453 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 ZFP36L2P47974 494 aaKnown RBP11.84□□□□□ -0.51
COL6A6-203ENST00000511332 GNGT1P63211 74 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 PHC1P78364 1004 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 EFR3AQ14156 821 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 LASP1Q14847 261 aaKnown RBP11.84□□□□□ -0.51
COL6A6-203ENST00000511332 DECR1Q16698 335 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 TBCELQ5QJ74 424 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 SLC22A10Q63ZE4 541 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 GK5Q6ZS86 529 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 MDGA2Q7Z553 956 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 BCORP1Q8N888 145 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 POGLUT1Q8NBL1 392 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 OR10G3Q8NGC4 313 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 OR5AK3PQ8NH89 298 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 GOT1L1Q8NHS2 421 aaPredicted RBP11.84□□□□□ -0.51
COL6A6-203ENST00000511332 CPT1CQ8TCG5 803 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 PAQR8Q8TEZ7 354 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 SLC9A6Q92581 669 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 TMBIM1Q969X1 311 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 ITCHQ96J02 903 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 SLC35G5Q96KT7 338 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 COL21A1Q96P44 957 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 STACQ99469 402 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 ACTRT3Q9BYD9 372 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 HES7Q9BYE0 225 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 ZNF385DQ9H6B1 395 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 SH2D2AQ9NP31 389 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 DUSP22Q9NRW4 184 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 AGPAT4Q9NRZ5 378 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 GIN1Q9NXP7 522 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 CCDC167Q9P0B6 97 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 MAP10Q9P2G4 905 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 CBLCQ9ULV8 474 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 CHCHD2Q9Y6H1 151 aaPredicted RBP11.84□□□□□ -0.51
COL6A6-203ENST00000511332 SHANK1Q9Y566 2161 aa11.84□□□□□ -0.51
COL6A6-203ENST00000511332 ASPDHA6ND91 283 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 CCDC154A6NI56 674 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 RFXANKO14593 260 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 PEX1O43933 1283 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 NME6O75414 186 aaPredicted RBP11.83□□□□□ -0.52
COL6A6-203ENST00000511332 NKX2-2O95096 273 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 CCL3P10147 92 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 CHI3L1P36222 383 aaPredicted RBP11.83□□□□□ -0.52
COL6A6-203ENST00000511332 MAP3K8P41279 467 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 MEOX1P50221 254 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 PNLIPRP2P54317 469 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 FBXW4P57775 412 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 GAB1Q13480 694 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 INPP5JQ15735 1006 aaPredicted RBP11.83□□□□□ -0.52
COL6A6-203ENST00000511332 AGKQ53H12 422 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 CDC73Q6P1J9 531 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 BLOC1S3Q6QNY0 202 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 NUP54Q7Z3B4 507 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 SPATA21Q7Z572 469 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 WDR53Q7Z5U6 358 aaPredicted RBP11.83□□□□□ -0.52
COL6A6-203ENST00000511332 SULF2Q8IWU5 870 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 COX18Q8N8Q8 333 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 OR5M3Q8NGP4 307 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 DNAJB8Q8NHS0 232 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 FBXO30Q8TB52 745 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 SPPL2AQ8TCT8 520 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 GPR151Q8TDV0 419 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 C10orf82Q8WW14 230 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 DIO2Q92813 273 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 TMCO6Q96DC7 493 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 SPDL1Q96EA4 605 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 SLC35A4Q96G79 324 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 FRMD6Q96NE9 622 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 FAM173AQ9BQD7 235 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 SLC35A5Q9BS91 424 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 TRIM4Q9C037 500 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 METTL7AQ9H8H3 244 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 GPATCH2Q9NW75 528 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 PCDHGB3Q9Y5G1 929 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 CFAP46Q8IYW2 2715 aa11.83□□□□□ -0.52
COL6A6-203ENST00000511332 GMNCA6NCL1 334 aa11.82□□□□□ -0.52
COL6A6-203ENST00000511332 ANKRD33BA6NCL7 494 aa11.82□□□□□ -0.52
COL6A6-203ENST00000511332 DUXAA6NLW8 204 aa11.82□□□□□ -0.52
COL6A6-203ENST00000511332 ACOT7O00154 380 aa11.82□□□□□ -0.52
COL6A6-203ENST00000511332 HS6ST1O60243 411 aa11.82□□□□□ -0.52
COL6A6-203ENST00000511332 TSPAN2O60636 221 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms