RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ENPEPQ07075 957 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 RCN2Q14257 317 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 HNF4GQ14541 408 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 MESDQ14696 234 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 GXYLT1Q4G148 440 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 SYTL3Q4VX76 610 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 LRRC23Q53EV4 343 aaPredicted RBP4.91□□□□□ -1.62
GYPB-212ENST00000511198 PYCR3Q53H96 274 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 VAX1Q5SQQ9 334 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 C6orf163Q5TEZ5 329 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 DGAT2L7PQ6IED9 249 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 SPOPLQ6IQ16 392 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 NLRP9Q7RTR0 991 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 SLC9B2Q86UD5 537 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 HORMAD2Q8N7B1 307 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 PTGR2Q8N8N7 351 aaPredicted RBP4.91□□□□□ -1.62
GYPB-212ENST00000511198 OR1L3Q8NH93 324 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 MIPOL1Q8TD10 442 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 STMN2Q93045 179 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 BTN2A3PQ96KV6 586 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 RPRD1AQ96P16 312 aaPredicted RBP4.91□□□□□ -1.62
GYPB-212ENST00000511198 FRG2BQ96QU4 278 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 ACCSQ96QU6 501 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 CCL19Q99731 98 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 CENPKQ9BS16 269 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 NUP85Q9BW27 656 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 MIS12Q9H081 205 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 SHARPINQ9H0F6 387 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 STN1Q9H668 368 aaKnown RBP4.91□□□□□ -1.62
GYPB-212ENST00000511198 DENND2DQ9H6A0 471 aaPredicted RBP4.91□□□□□ -1.62
GYPB-212ENST00000511198 UCK1Q9HA47 277 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 AGPAT3Q9NRZ7 376 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 TAS2R14Q9NYV8 317 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 NDUFAF4Q9P032 175 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 STX18Q9P2W9 335 aaKnown RBP4.91□□□□□ -1.62
GYPB-212ENST00000511198 HAO1Q9UJM8 370 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 TMCO1Q9UM00 188 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 TMEM98Q9Y2Y6 226 aa4.91□□□□□ -1.62
GYPB-212ENST00000511198 A0A0A0MQY5 61 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 EXOC1LA0A1B0GW35 172 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 TMEM89A2RUT3 159 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 ASPDHA6ND91 283 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 TCF21O43680 179 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 LIASO43766 372 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 CLDN11O75508 207 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 PSMG1O95456 288 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 POP4O95707 220 aaKnown RBP4.9□□□□□ -1.63
GYPB-212ENST00000511198 RHOCP08134 193 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 MMP11P24347 488 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 GSTM2P28161 218 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 PHBP35232 272 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 MMP12P39900 470 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 CAPZBP47756 277 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 ZFP36L2P47974 494 aaKnown RBP4.9□□□□□ -1.63
GYPB-212ENST00000511198 RAP1GDS1P52306 607 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 XIAPP98170 497 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 INCA1Q0VD86 236 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 RALGDSQ12967 914 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 PSMD6Q15008 389 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 RCN1Q15293 331 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 TMED2Q15363 201 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 ACKR1Q16570 336 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 CCNG2Q16589 344 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 KLHL38Q2WGJ6 581 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 TRMT5Q32P41 509 aaKnown RBP4.9□□□□□ -1.63
GYPB-212ENST00000511198 CBWD6Q4V339 395 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 ALFQ53S48 1182 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 ZNF766Q5HY98 468 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 CBWD3Q5JTY5 395 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 RABGAP1LQ5R372 815 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 CBWD5Q5RIA9 395 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 SH2D4BQ5SQS7 431 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 HHATQ5VTY9 493 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 AADACL2Q6P093 401 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 DOK6Q6PKX4 331 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 Q6ZTC4 211 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 TMEM26Q6ZUK4 368 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 FAM47EQ6ZV65 393 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 PHLDB2Q86SQ0 1253 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 TRIM74Q86UV6 250 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 TRIM73Q86UV7 250 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 LCA5Q86VQ0 697 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 ZNF677Q86XU0 584 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 DNAAF5Q86Y56 855 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 FAM71AQ8IYT1 594 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 ST13P4Q8IZP2 240 aaPredicted RBP4.9□□□□□ -1.63
GYPB-212ENST00000511198 DCAF4L2Q8NA75 395 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 ANKRD52Q8NB46 1076 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 OR8K5Q8NH50 307 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 FAM81AQ8TBF8 368 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 SLC20A1Q8WUM9 679 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 MCUR1Q96AQ8 359 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 C3orf49Q96BT1 292 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 ZNF653Q96CK0 615 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 CELF6Q96J87 481 aaKnown RBP4.9□□□□□ -1.63
GYPB-212ENST00000511198 OR2M4Q96R27 311 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 ZNF184Q99676 751 aaPredicted RBP4.9□□□□□ -1.63
GYPB-212ENST00000511198 PAIP2Q9BPZ3 127 aaKnown RBP4.9□□□□□ -1.63
GYPB-212ENST00000511198 BTBD10Q9BSF8 475 aa4.9□□□□□ -1.63
GYPB-212ENST00000511198 CRB3Q9BUF7 120 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms