RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 ACPTQ9BZG2 426 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 LIME1Q9H400 295 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 TAS2R10Q9NYW0 307 aa14.01□□□□□ -0.17
TPM3-219ENST00000509409 NCKAP5O14513 1909 aa14□□□□□ -0.17
TPM3-219ENST00000509409 MBD3L4A6NDZ8 208 aaPredicted RBP14□□□□□ -0.17
TPM3-219ENST00000509409 MBD3L3A6NE82 208 aaPredicted RBP14□□□□□ -0.17
TPM3-219ENST00000509409 MBD3L5A6NJ08 208 aaPredicted RBP14□□□□□ -0.17
TPM3-219ENST00000509409 RIPK2O43353 540 aa14□□□□□ -0.17
TPM3-219ENST00000509409 NME6O75414 186 aaPredicted RBP14□□□□□ -0.17
TPM3-219ENST00000509409 ERN1O75460 977 aaKnown RBP14□□□□□ -0.17
TPM3-219ENST00000509409 ENO1P06733 434 aaKnown RBP14□□□□□ -0.17
TPM3-219ENST00000509409 ANXA4P09525 319 aaPredicted RBP14□□□□□ -0.17
TPM3-219ENST00000509409 PYGBP11216 843 aa14□□□□□ -0.17
TPM3-219ENST00000509409 CPN1P15169 458 aa14□□□□□ -0.17
TPM3-219ENST00000509409 TCEA1P23193 301 aaKnown RBP14□□□□□ -0.17
TPM3-219ENST00000509409 DNASE1P24855 282 aa14□□□□□ -0.17
TPM3-219ENST00000509409 HTR6P50406 440 aa14□□□□□ -0.17
TPM3-219ENST00000509409 PKNOX1P55347 436 aa14□□□□□ -0.17
TPM3-219ENST00000509409 C2orf80Q0P641 193 aa14□□□□□ -0.17
TPM3-219ENST00000509409 LCP2Q13094 533 aa14□□□□□ -0.17
TPM3-219ENST00000509409 EFR3AQ14156 821 aa14□□□□□ -0.17
TPM3-219ENST00000509409 FBXL19-AS1Q494R0 122 aa14□□□□□ -0.17
TPM3-219ENST00000509409 OR5M10Q6IEU7 315 aa14□□□□□ -0.17
TPM3-219ENST00000509409 POMZP3Q6PJE2 187 aa14□□□□□ -0.17
TPM3-219ENST00000509409 IFNEQ86WN2 208 aa14□□□□□ -0.17
TPM3-219ENST00000509409 CDC20BQ86Y33 519 aa14□□□□□ -0.17
TPM3-219ENST00000509409 SLC44A2Q8IWA5 706 aaPredicted RBP14□□□□□ -0.17
TPM3-219ENST00000509409 WDSUB1Q8N9V3 476 aa14□□□□□ -0.17
TPM3-219ENST00000509409 MBD3L2Q8NHZ7 208 aaPredicted RBP14□□□□□ -0.17
TPM3-219ENST00000509409 LINC01560Q8TB33 94 aa14□□□□□ -0.17
TPM3-219ENST00000509409 NINJ1Q92982 152 aa14□□□□□ -0.17
TPM3-219ENST00000509409 ERP27Q96DN0 273 aa14□□□□□ -0.17
TPM3-219ENST00000509409 TUBA1CQ9BQE3 449 aa14□□□□□ -0.17
TPM3-219ENST00000509409 FOLH1BQ9HBA9 442 aa14□□□□□ -0.17
TPM3-219ENST00000509409 SLC35C2Q9NQQ7 365 aa14□□□□□ -0.17
TPM3-219ENST00000509409 TAS2R9Q9NYW1 312 aa14□□□□□ -0.17
TPM3-219ENST00000509409 ST6GALNAC2Q9UJ37 374 aa14□□□□□ -0.17
TPM3-219ENST00000509409 DKKL1Q9UK85 242 aa14□□□□□ -0.17
TPM3-219ENST00000509409 OR10H1Q9Y4A9 318 aa14□□□□□ -0.17
TPM3-219ENST00000509409 CRCPO75575 148 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 IL18BPO95998 194 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 GSTA1P08263 222 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 CT45A8P0DMV1 189 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 CT45A9P0DMV2 189 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 EPXP11678 715 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 CD99P14209 185 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 TIA1P31483 386 aaKnown RBP eCLIP13.99□□□□□ -0.17
TPM3-219ENST00000509409 SLCO1A2P46721 670 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 STARP49675 285 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 CORO7P57737 925 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 CEBPEQ15744 281 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 IMPG1Q17R60 797 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 CT45A2Q5DJT8 189 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 SH2D4BQ5SQS7 431 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 AAGABQ6PD74 315 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 FAM9CQ8IZT9 166 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 CEP112Q8N8E3 955 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 CHDHQ8NE62 594 aaPredicted RBP13.99□□□□□ -0.17
TPM3-219ENST00000509409 ACMSDQ8TDX5 336 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 SFXN2Q96NB2 322 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 BTBD9Q96Q07 612 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 KCNA7Q96RP8 456 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 FOXC2Q99958 501 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 OR2B2Q9GZK3 357 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 MID1IP1Q9NPA3 183 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 PSMC3IPQ9P2W1 217 aaPredicted RBP13.99□□□□□ -0.17
TPM3-219ENST00000509409 TBK1Q9UHD2 729 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 DCDC2Q9UHG0 476 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 CBLCQ9ULV8 474 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 PLEKHA6Q9Y2H5 1048 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 RPH3AQ9Y2J0 694 aaPredicted RBP13.99□□□□□ -0.17
TPM3-219ENST00000509409 WIF1Q9Y5W5 379 aa13.99□□□□□ -0.17
TPM3-219ENST00000509409 TSPAN2O60636 221 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 FREM3P0C091 2139 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 SRD5A2P31213 254 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 CPA2P48052 419 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 MRPS22P82650 360 aaKnown RBP13.98□□□□□ -0.17
TPM3-219ENST00000509409 ZNF155Q12901 538 aaPredicted RBP13.98□□□□□ -0.17
TPM3-219ENST00000509409 SLC29A2Q14542 456 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 DAZAP2Q15038 168 aaPredicted RBP13.98□□□□□ -0.17
TPM3-219ENST00000509409 CHMP1BQ7LBR1 199 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 LUZP2Q86TE4 346 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 OR4K17Q8NGC6 315 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 EFHD2Q96C19 240 aaPredicted RBP13.98□□□□□ -0.17
TPM3-219ENST00000509409 INTS12Q96CB8 462 aaKnown RBP13.98□□□□□ -0.17
TPM3-219ENST00000509409 L3HYPDHQ96EM0 354 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 SLC35A4Q96G79 324 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 TM9SF2Q99805 663 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 YIPF4Q9BSR8 244 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 RBM24Q9BX46 236 aaKnown RBP13.98□□□□□ -0.17
TPM3-219ENST00000509409 FBXL2Q9UKC9 423 aa13.98□□□□□ -0.17
TPM3-219ENST00000509409 FAM221AA4D161 298 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 CLCA1A8K7I4 914 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 PLOD3O60568 738 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 DIAPH2O60879 1101 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 COQ9O75208 318 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 RCBTB2O95199 551 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 MYL2P10916 166 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 GRK2P25098 689 aa13.97□□□□□ -0.17
TPM3-219ENST00000509409 DPP4P27487 766 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms