RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 H0YIV9 168 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 FOXE1O00358 373 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-211ENST00000508546 PHGDHO43175 533 aaKnown RBP8.45□□□□□ -1.06
NEDD9-211ENST00000508546 UGDHO60701 494 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 ABCB7O75027 752 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 SEMA3DO95025 777 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 PLAUP00749 431 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 THBS1P07996 1170 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 FAM157CP0CG43 387 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 EPB42P16452 691 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 NT5EP21589 574 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 DRD5P21918 477 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 DPP4P27487 766 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 IDUAP35475 653 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 PPICP45877 212 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 CLDN15P56746 228 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 EEFSECP57772 596 aaKnown RBP8.45□□□□□ -1.06
NEDD9-211ENST00000508546 SIRPAP78324 504 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 OCRLQ01968 901 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 MGAT2Q10469 447 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 PRICKLE4Q2TBC4 344 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 ANKRD34AQ69YU3 496 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 ADAM5Q6NVV9 412 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 DNM1P46Q6ZS02 220 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 NUDT13Q86X67 352 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 STAG3L4Q8TBR4 150 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 RNF138Q8WVD3 245 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 FIG4Q92562 907 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 SLC35A4Q96G79 324 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 OSBPL9Q96SU4 736 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 GPR22Q99680 433 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 LRRC1Q9BTT6 524 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 ITPAQ9BY32 194 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 KLHL4Q9C0H6 718 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 CAB39LQ9H9S4 337 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 YAE1D1Q9NRH1 226 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 DKKL1Q9UK85 242 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 PROCRQ9UNN8 238 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 MTO1Q9Y2Z2 717 aaKnown RBP8.45□□□□□ -1.06
NEDD9-211ENST00000508546 ZNF175Q9Y473 711 aa8.45□□□□□ -1.06
NEDD9-211ENST00000508546 EFCAB8A8MWE9 144 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 GBAP04062 536 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 ATP1B1P05026 303 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 CTAGE8P0CG41 777 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 STMN1P16949 149 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 GRK2P25098 689 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 DSCR4P56555 118 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-211ENST00000508546 ARL4CP56559 192 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 EXOSC7Q15024 291 aaKnown RBP8.44□□□□□ -1.06
NEDD9-211ENST00000508546 ZKSCAN8Q15776 578 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-211ENST00000508546 FAM111BQ6SJ93 734 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 FAM214BQ7L5A3 538 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 ISCA2Q86U28 154 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 ANKMY2Q8IV38 441 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 CTAGE4Q8IX94 777 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 FBXO36Q8NEA4 188 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 WDR20Q8TBZ3 569 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 ACTRT1Q8TDG2 376 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 AKAP1Q92667 903 aaKnown RBP eCLIP8.44□□□□□ -1.06
NEDD9-211ENST00000508546 EXT2Q93063 718 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 ZBED6CLQ96FA7 236 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-211ENST00000508546 PLPPR2Q96GM1 343 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 COL21A1Q96P44 957 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 ATOH8Q96SQ7 321 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 PINK1Q9BXM7 581 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 OR10A4Q9H209 315 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 SMYD2Q9NRG4 433 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 PLSCR4Q9NRQ2 329 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 MAT2BQ9NZL9 334 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 EHD3Q9NZN3 535 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 PRODH2Q9UF12 536 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 BCAP29Q9UHQ4 241 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 ADAM29Q9UKF5 820 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 CES1P1Q9UKY3 287 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 LAMP3Q9UQV4 416 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 PLLPQ9Y342 182 aa8.44□□□□□ -1.06
NEDD9-211ENST00000508546 GOLGA6L10A6NI86 522 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 B4DXG7 233 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 E7ESA3 106 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 LINC01387J3KSC0 135 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 UBXN8O00124 270 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 TSPAN2O60636 221 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 KERAO60938 352 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 REM1O75628 298 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 CBX7O95931 251 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 ALDOAP04075 364 aaKnown RBP8.43□□□□□ -1.06
NEDD9-211ENST00000508546 FCGR2AP12318 317 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 IL11P20809 199 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 THBS2P35442 1172 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 EMDP50402 254 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 SUCLG1P53597 346 aaKnown RBP8.43□□□□□ -1.06
NEDD9-211ENST00000508546 GAS1P54826 345 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 RAB10P61026 200 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 PSPHP78330 225 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 EFR3AQ14156 821 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 PON3Q15166 354 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 TEX35Q5T0J7 233 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 OR5M10Q6IEU7 315 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 STAC2Q6ZMT1 411 aa8.43□□□□□ -1.06
NEDD9-211ENST00000508546 MYLK4Q86YV6 388 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms