RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 GVQW1Q8N7I0 195 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 TBCKQ8TEA7 893 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 TCP11Q8WWU5 503 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 MRPL24Q96A35 216 aaKnown RBP3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 ERP27Q96DN0 273 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 RBM18Q96H35 190 aaKnown RBP3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 PCED1BQ96HM7 432 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 PAXXQ9BUH6 204 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 FAM212BQ9NTI7 297 aaPredicted RBP3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 PLEK2Q9NYT0 353 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 TRMT112Q9UI30 125 aaKnown RBP3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 OR1A2Q9Y585 309 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 FAM208BQ5VWN6 2430 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 NBEAQ8NFP9 2946 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 SH3TC1Q8TE82 1336 aa3.65□□□□□ -1.83
TOPBP1-206ENST00000508524 LRRC37A2A6NM11 1700 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 ARAP2Q8WZ64 1704 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 A0A087X0K7 114 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 RNF212BA8MTL3 300 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 FCGR3AP08637 254 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 CASTP20810 708 aaKnown RBP3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 HOXD10P28358 340 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 ANKRD55Q3KP44 614 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 DCLRE1AQ6PJP8 1040 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 ABRAXAS1Q6UWZ7 409 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 WDR49Q8IV35 697 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 AQP12AQ8IXF9 295 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 NHLRC2Q8NBF2 726 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 CCDC197Q8NCU1 140 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 MR1Q95460 341 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 PNPLA2Q96AD5 504 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 ESAMQ96AP7 390 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 ZNF559Q9BR84 538 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 TTYH2Q9BSA4 534 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 LRRC2Q9BYS8 371 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 DPEP3Q9H4B8 488 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 ZCCHC17Q9NP64 241 aaKnown RBP3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 ABCC13Q9NSE7 274 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 MLXQ9UH92 298 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 CLEC4EQ9ULY5 219 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 PLXNB2O15031 1838 aa3.64□□□□□ -1.83
TOPBP1-206ENST00000508524 MED23Q9ULK4 1368 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 ITPR1Q14643 2758 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 ECM29Q5VYK3 1845 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 MAGEB16A2A368 324 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 HDAC3O15379 428 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 KIAA0513O60268 411 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 RGRP47804 291 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 GSTO1P78417 241 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 CXCL6P80162 114 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 SCN1BQ07699 218 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 PPIL2Q13356 520 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 MEF2DQ14814 521 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 GSG1Q2KHT4 349 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 C2orf83Q53S99 150 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 SNRNP48Q6IEG0 339 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 ANKRD23Q86SG2 305 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 C17orf64Q86WR6 236 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 ERO1BQ86YB8 467 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 CHDHQ8NE62 594 aaPredicted RBP3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 OR4F5Q8NH21 305 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 SPATA18Q8TC71 538 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 SNRNP27Q8WVK2 155 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 FAM162AQ96A26 154 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 PARK7Q99497 189 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 NUSAP1Q9BXS6 441 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 CUEDC2Q9H467 287 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 SRD5A3Q9H8P0 318 aa3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 HELZ2Q9BYK8 2649 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 DSPP15924 2871 aaKnown RBP3.63□□□□□ -1.83
TOPBP1-206ENST00000508524 WDR46O15213 610 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 P4HA1P13674 534 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 MGMTP16455 207 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 GPX3P22352 226 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 GDF1P27539 372 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 PRKAR2BP31323 418 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 MTIF2P46199 727 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 PAX2Q02962 417 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 ARHGAP1Q07960 439 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 SPHARQ15513 63 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 TGIF1Q15583 401 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 DCAF12Q5T6F0 453 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 DMKNQ6E0U4 476 aaPredicted RBP3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 PET117Q6UWS5 81 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 NHLRC1Q6VVB1 395 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 COPS6Q7L5N1 327 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 KLHL7Q8IXQ5 586 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 SIX6OS1Q8N1H7 587 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 AFAP1L1Q8TED9 768 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 GANCQ8TET4 914 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 UBLCP1Q8WVY7 318 aaPredicted RBP3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 C16orf58Q96GQ5 468 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 SSX3Q99909 188 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 CXXC4Q9H2H0 198 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 TDRD3Q9H7E2 651 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 IL1RL2Q9HB29 575 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 FRMPD3Q5JV73 1810 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 MYO3BQ8WXR4 1341 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 TECTAO75443 2155 aa3.62□□□□□ -1.83
TOPBP1-206ENST00000508524 COL4A6Q14031 1691 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms