RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PGDP52209 483 aa8□□□□□ -1.13
USP46-207ENST00000508499 EEFSECP57772 596 aaKnown RBP8□□□□□ -1.13
USP46-207ENST00000508499 RBBP4Q09028 425 aa8□□□□□ -1.13
USP46-207ENST00000508499 TP53BP2Q13625 1128 aa8□□□□□ -1.13
USP46-207ENST00000508499 EXOSC7Q15024 291 aaKnown RBP8□□□□□ -1.13
USP46-207ENST00000508499 DNAL1Q4LDG9 190 aa8□□□□□ -1.13
USP46-207ENST00000508499 TMEM81Q6P7N7 255 aa8□□□□□ -1.13
USP46-207ENST00000508499 IGFL2Q6UWQ7 119 aa8□□□□□ -1.13
USP46-207ENST00000508499 CALHM3Q86XJ0 350 aa8□□□□□ -1.13
USP46-207ENST00000508499 GPALPP1Q8IXQ4 340 aa8□□□□□ -1.13
USP46-207ENST00000508499 SLC15A3Q8IY34 581 aa8□□□□□ -1.13
USP46-207ENST00000508499 ZNF321PQ8N8H1 164 aa8□□□□□ -1.13
USP46-207ENST00000508499 RBM15BQ8NDT2 890 aaKnown RBP8□□□□□ -1.13
USP46-207ENST00000508499 SIMC1Q8NDZ2 872 aa8□□□□□ -1.13
USP46-207ENST00000508499 PRR7Q8TB68 274 aa8□□□□□ -1.13
USP46-207ENST00000508499 FAM110BQ8TC76 370 aa8□□□□□ -1.13
USP46-207ENST00000508499 ZCCHC14Q8WYQ9 949 aaKnown RBP8□□□□□ -1.13
USP46-207ENST00000508499 TMEM125Q96AQ2 219 aa8□□□□□ -1.13
USP46-207ENST00000508499 LCORQ96JN0 433 aaPredicted RBP8□□□□□ -1.13
USP46-207ENST00000508499 LHPPQ9H008 270 aa8□□□□□ -1.13
USP46-207ENST00000508499 RNF32Q9H0A6 362 aa8□□□□□ -1.13
USP46-207ENST00000508499 SAP130Q9H0E3 1048 aa8□□□□□ -1.13
USP46-207ENST00000508499 SERHL2Q9H4I8 314 aa8□□□□□ -1.13
USP46-207ENST00000508499 FOLH1BQ9HBA9 442 aa8□□□□□ -1.13
USP46-207ENST00000508499 ZNF160Q9HCG1 818 aa8□□□□□ -1.13
USP46-207ENST00000508499 MYOTQ9UBF9 498 aa8□□□□□ -1.13
USP46-207ENST00000508499 FAF1Q9UNN5 650 aaPredicted RBP8□□□□□ -1.13
USP46-207ENST00000508499 PCDHGB7Q9Y5F8 929 aa8□□□□□ -1.13
USP46-207ENST00000508499 PCDHGA9Q9Y5G4 932 aaKnown RBP8□□□□□ -1.13
USP46-207ENST00000508499 SNX8Q9Y5X2 465 aa8□□□□□ -1.13
USP46-207ENST00000508499 KCNMB2Q9Y691 235 aa8□□□□□ -1.13
USP46-207ENST00000508499 NCOR2Q9Y618 2525 aa8□□□□□ -1.13
USP46-207ENST00000508499 CDC14CA4D256 554 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 A8MUA0 341 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 B2RBV5 119 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 GSNP06396 782 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 HSD17B1P14061 328 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 MATN1P21941 496 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 PIGAP37287 484 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 TMED10P49755 219 aaKnown RBP7.99□□□□□ -1.13
USP46-207ENST00000508499 PNLIPRP2P54317 469 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 PSMD4P55036 377 aaKnown RBP7.99□□□□□ -1.13
USP46-207ENST00000508499 PSME3P61289 254 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 SRSF6Q13247 344 aaKnown RBP7.99□□□□□ -1.13
USP46-207ENST00000508499 VEZF1Q14119 521 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 GNA13Q14344 377 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 LASP1Q14847 261 aaKnown RBP7.99□□□□□ -1.13
USP46-207ENST00000508499 ADRM1Q16186 407 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.99□□□□□ -1.13
USP46-207ENST00000508499 ARHGAP11BQ3KRB8 267 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 SPDYE7PQ495Y7 208 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 GTDC1Q4AE62 458 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 PIGGQ5H8A4 983 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 CRB2Q5IJ48 1285 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 ERICH5Q6P6B1 374 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 ASRGL1Q7L266 308 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 RNF130Q86XS8 419 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 PTRH1Q86Y79 214 aaKnown RBP7.99□□□□□ -1.13
USP46-207ENST00000508499 HPS6Q86YV9 775 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 SLC30A8Q8IWU4 369 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 GALNT16Q8N428 558 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 SLC5A8Q8N695 610 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 SLC16A11Q8NCK7 471 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 OR5AK3PQ8NH89 298 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 RNF138Q8WVD3 245 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 SLC35A4Q96G79 324 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 REXO5Q96IC2 774 aaKnown RBP7.99□□□□□ -1.13
USP46-207ENST00000508499 SLC35G5Q96KT7 338 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 ZNF354BQ96LW1 612 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 TRNT1Q96Q11 434 aaKnown RBP7.99□□□□□ -1.13
USP46-207ENST00000508499 OR7D2Q96RA2 312 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 LMF1Q96S06 567 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 SECISBP2Q96T21 854 aaKnown RBP7.99□□□□□ -1.13
USP46-207ENST00000508499 BTBD10Q9BSF8 475 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 BTBD2Q9BX70 525 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 ITPAQ9BY32 194 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 DEFB126Q9BYW3 111 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 ING2Q9H160 280 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 LRMDAQ9H2I8 198 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 IKZF5Q9H5V7 419 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 Q9N2J8 555 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 A4GALTQ9NPC4 353 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 EXD2Q9NVH0 621 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 BCAP29Q9UHQ4 241 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 TEKT2Q9UIF3 430 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 MRTO4Q9UKD2 239 aaKnown RBP7.99□□□□□ -1.13
USP46-207ENST00000508499 PRDM4Q9UKN5 801 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 DTX4Q9Y2E6 619 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 YARS2Q9Y2Z4 477 aaKnown RBP7.99□□□□□ -1.13
USP46-207ENST00000508499 DSPPQ9NZW4 1301 aa7.99□□□□□ -1.13
USP46-207ENST00000508499 ANKRD11Q6UB99 2663 aaPredicted RBP7.98□□□□□ -1.13
USP46-207ENST00000508499 TRBV11-1A0A0K0K1C0 115 aa7.98□□□□□ -1.13
USP46-207ENST00000508499 MYOCOSA0A1B0GUC4 107 aa7.98□□□□□ -1.13
USP46-207ENST00000508499 OR6C70A6NIJ9 312 aa7.98□□□□□ -1.13
USP46-207ENST00000508499 FAM220BPB1ANY3 271 aa7.98□□□□□ -1.13
USP46-207ENST00000508499 NME4O00746 187 aa7.98□□□□□ -1.13
USP46-207ENST00000508499 NADKO95544 446 aaPredicted RBP7.98□□□□□ -1.13
USP46-207ENST00000508499 NGFRP08138 427 aa7.98□□□□□ -1.13
USP46-207ENST00000508499 ALOX5P09917 674 aa7.98□□□□□ -1.13
USP46-207ENST00000508499 TFPTP0C1Z6 253 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms