RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 OR2B2Q9GZK3 357 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 PFDN4Q9NQP4 134 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 SLC35C2Q9NQQ7 365 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 EMCNQ9ULC0 261 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 EXO1Q9UQ84 846 aaKnown RBP11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 MED12LQ86YW9 2145 aa11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 FLNAP21333 2647 aaKnown RBP11.84□□□□□ -0.51
HMGCS1-205ENST00000508319 B4DXG7 233 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 KIF2AO00139 706 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 UBFD1O14562 309 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 PLOD3O60568 738 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 ERN1O75460 977 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 ACTL6AO96019 429 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 PYGBP11216 843 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 CD1EP15812 388 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 SLCO1A2P46721 670 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 ART1P52961 327 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 GFRA1P56159 465 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 SLC29A2Q14542 456 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 HEPACAMQ14CZ8 416 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 SF3B4Q15427 424 aaKnown RBP eCLIP11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 ERCC6LQ2NKX8 1250 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 FLYWCH1Q4VC44 716 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 ADGRE4PQ86SQ3 457 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 IFT20Q8IY31 132 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 SAMD14Q8IZD0 417 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 CEP112Q8N8E3 955 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 C9orf106Q8NAJ2 232 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 OR7G2Q8NG99 324 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 ZPLD1Q8TCW7 415 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 ADOQ96SZ5 270 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 GPATCH1Q9BRR8 931 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 G6PC3Q9BUM1 346 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 CALHM2Q9HA72 323 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 FOLH1BQ9HBA9 442 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 MID1IP1Q9NPA3 183 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 RASSF1Q9NS23 344 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 SIRT5Q9NXA8 310 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 DNAJB12Q9NXW2 375 aaKnown RBP11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 TBK1Q9UHD2 729 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 FOXD3Q9UJU5 478 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 WIF1Q9Y5W5 379 aa11.83□□□□□ -0.52
HMGCS1-205ENST00000508319 SERTM1A2A2V5 107 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 G3V2L1 256 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 TSPAN2O60636 221 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 REM1O75628 298 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 CBR3O75828 277 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 BCAS2O75934 225 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 CPN1P15169 458 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 DDCP20711 480 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 GSTM5P46439 218 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 IST1P53990 364 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 BTKQ06187 659 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 ZNF763Q0D2J5 394 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 RCAN2Q14206 197 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 PRSS53Q2L4Q9 553 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 SCIMPQ6UWF3 145 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 ZYG11AQ6WRX3 759 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 SH2D5Q6ZV89 423 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 PLCZ1Q86YW0 608 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 GSPT2Q8IYD1 628 aaKnown RBP11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 FAM9CQ8IZT9 166 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 OR14L1PQ8NHC6 308 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 KIF18AQ8NI77 898 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 TMCO6Q96DC7 493 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 TUBA1CQ9BQE3 449 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 RHOXF2Q9BQY4 288 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 POLDIP3Q9BY77 421 aaKnown RBP11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 SHCBP1LQ9BZQ2 653 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 CLEC4MQ9H2X3 399 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 LIME1Q9H400 295 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 GIMAP4Q9NUV9 329 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 JKAMPQ9P055 326 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 CLCF1Q9UBD9 225 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 FBXL2Q9UKC9 423 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 CBLCQ9ULV8 474 aa11.82□□□□□ -0.52
HMGCS1-205ENST00000508319 A0A1W2PPM1 405 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 CCDC151A5D8V7 595 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 A6NNC1 897 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 C17orf51A8MQB3 221 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 EEF1E1-BLOC1S5C9J1V9 151 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 H0Y3Z8 333 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 EEF1E1O43324 174 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 GLRA3O75311 464 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 IL18BPO95998 194 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 ANXA4P09525 319 aaPredicted RBP11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 CYP4B1P13584 511 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 TACR1P25103 407 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 CTSSP25774 331 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 IL12BP29460 328 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 SRD5A2P31213 254 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 GCKP35557 465 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 LHX2P50458 406 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 AGFG1P52594 562 aaKnown RBP11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 GAS1P54826 345 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 PSPHP78330 225 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 PSG6Q00889 435 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 EFR3AQ14156 821 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 ENPP6Q6UWR7 440 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 PLXDC2Q6UX71 529 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms