RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 MS4A4EQ96PG1 132 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 NPAS2Q99743 824 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 INPP5KQ9BT40 448 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 ITPAQ9BY32 194 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 EPS8L2Q9H6S3 715 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 ZNF552Q9H707 407 aaPredicted RBP9.28□□□□□ -0.92
NUP54-203ENST00000504173 LIN28AQ9H9Z2 209 aaKnown RBP9.28□□□□□ -0.92
NUP54-203ENST00000504173 FOLH1BQ9HBA9 442 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 EQTNQ9NQ60 294 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 NTMQ9P121 344 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 ABI3Q9P2A4 366 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 MYOTQ9UBF9 498 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 NDUFAF1Q9Y375 327 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 PCDHGA9Q9Y5G4 932 aaKnown RBP9.28□□□□□ -0.92
NUP54-203ENST00000504173 DOCK10Q96BY6 2186 aa9.28□□□□□ -0.92
NUP54-203ENST00000504173 ASPDHA6ND91 283 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 MAN1A2O60476 641 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 ERN1O75460 977 aaKnown RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 PSMG1O95456 288 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 GSNP06396 782 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 UQCRC2P22695 453 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 CHI3L1P36222 383 aaPredicted RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 TRPC1P48995 793 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 PRIM2P49643 509 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 NR0B1P51843 470 aaKnown RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 DCAF7P61962 342 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 MFAP5Q13361 173 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 GAB1Q13480 694 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 LASP1Q14847 261 aaKnown RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 TLR1Q15399 786 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 ZNHIT3Q15649 155 aaPredicted RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 NNATQ16517 81 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 MMEL1Q495T6 779 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 C16orf47Q6ZP98 133 aaPredicted RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 SNX32Q86XE0 403 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 BEST3Q8N1M1 668 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 CLEC4FQ8N1N0 589 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 ANKS4BQ8N8V4 417 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 TEX19Q8NA77 164 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 GOT1L1Q8NHS2 421 aaPredicted RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 FBXO30Q8TB52 745 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 SLC22A8Q8TCC7 542 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 JADE3Q92613 823 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 GTF2H4Q92759 462 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 ADIPOR1Q96A54 375 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 SLC35G5Q96KT7 338 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 VSTM2LQ96N03 204 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 LRRC37BQ96QE4 947 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 SMAD5Q99717 465 aaKnown RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 SLC35A5Q9BS91 424 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 CCDC106Q9BWC9 280 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 MYLK2Q9H1R3 596 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 SLC52A3Q9NQ40 469 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 SERHLQ9NQF3 203 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 STMN3Q9NZ72 180 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 LEF1Q9UJU2 399 aaPredicted RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 ERVK-11Q9UQG0 969 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 DTX4Q9Y2E6 619 aa9.27□□□□□ -0.93
NUP54-203ENST00000504173 YARS2Q9Y2Z4 477 aaKnown RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 NUP214P35658 2090 aaPredicted RBP9.27□□□□□ -0.93
NUP54-203ENST00000504173 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 A0A096LPI6 279 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 LOC100653049A0A140TA62 436 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 FRG2CA6NGY1 282 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 TMEM200CA6NKL6 621 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 BBIP1A8MTZ0 92 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 ITGA10O75578 1167 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 OR2J2O76002 312 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 KRT34O76011 436 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 KCNH1O95259 989 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 HMGN2P05204 90 aaKnown RBP9.26□□□□□ -0.93
NUP54-203ENST00000504173 KRT16P08779 473 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 PPICP45877 212 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 SSR4P51571 173 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 NRG3P56975 720 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 CORO7P57737 925 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 ARG2P78540 354 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 CYLC2Q14093 348 aaPredicted RBP9.26□□□□□ -0.93
NUP54-203ENST00000504173 GTDC1Q4AE62 458 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 PIGGQ5H8A4 983 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 PAGE3Q5JUK9 113 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 MFSD12Q6NUT3 480 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 ANGPTL8Q6UXH0 198 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 C6orf120Q7Z4R8 191 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 WDR53Q7Z5U6 358 aaPredicted RBP9.26□□□□□ -0.93
NUP54-203ENST00000504173 TAGAPQ8N103 731 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 ARMC10Q8N2F6 343 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 TMEM156Q8N614 296 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 POU5F2Q8N7G0 328 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 ZNF441Q8N8Z8 693 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 CDRT4Q8N9R6 151 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 C17orf47Q8NEP4 570 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 ASB15Q8WXK1 588 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 TM9SF4Q92544 642 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 SLC9A6Q92581 669 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 TP53INP1Q96A56 240 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 GIMAP5Q96F15 307 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 LCORQ96JN0 433 aaPredicted RBP9.26□□□□□ -0.93
NUP54-203ENST00000504173 BTBD9Q96Q07 612 aa9.26□□□□□ -0.93
NUP54-203ENST00000504173 LMF1Q96S06 567 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms