RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 PRAMEF25A6NGN4 478 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 OR6C70A6NIJ9 312 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 PDPK1O15530 556 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 CTIFO43310 598 aaKnown RBP16.82■□□□□ 0.28
HOXD11-202ENST00000498438 AKAP10O43572 662 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 REM1O75628 298 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 TRAPPC6AO75865 159 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 PTGDSP41222 190 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 SERPINB4P48594 390 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 NUP107P57740 925 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 ZNF385BQ569K4 471 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 XKR7Q5GH72 579 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 CEP85LQ5SZL2 805 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 WLSQ5T9L3 541 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 SLC30A6Q6NXT4 461 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 ANGPTL8Q6UXH0 198 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 SLC44A2Q8IWA5 706 aaPredicted RBP16.82■□□□□ 0.28
HOXD11-202ENST00000498438 OR2L13Q8N349 312 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 OR6Y1Q8NGX8 325 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 CA5BP1Q8WTZ4 195 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 ZNF764Q96H86 408 aaPredicted RBP16.82■□□□□ 0.28
HOXD11-202ENST00000498438 CENPHQ9H3R5 247 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 DDX18Q9NVP1 670 aaKnown RBP16.82■□□□□ 0.28
HOXD11-202ENST00000498438 GIMAP2Q9UG22 337 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 BAIAP2L1Q9UHR4 511 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 ZDHHC2Q9UIJ5 367 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 C19orf53Q9UNZ5 99 aaPredicted RBP16.82■□□□□ 0.28
HOXD11-202ENST00000498438 FAM215AQ9Y5M1 114 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 ABCA12Q86UK0 2595 aa16.82■□□□□ 0.28
HOXD11-202ENST00000498438 C2orf72A6NCS6 295 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 UPK1AO00322 258 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 PLOD2O00469 737 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 ABCB7O75027 752 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 ICOSLGO75144 302 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 PSMG1O95456 288 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 HPNP05981 417 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 TUBBP07437 444 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 ELAVL4P26378 380 aaKnown RBP16.81■□□□□ 0.28
HOXD11-202ENST00000498438 PTPN6P29350 595 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 IL12BP29460 328 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 KRT20P35900 424 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 CDK9P50750 372 aaKnown RBP16.81■□□□□ 0.28
HOXD11-202ENST00000498438 PSPHP78330 225 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 PMPCAQ10713 525 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 HSPB3Q12988 150 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 SNTA1Q13424 505 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 TIGD3Q6B0B8 471 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 RTL6Q6ICC9 239 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 LARP4Q71RC2 724 aaKnown RBP eCLIP16.81■□□□□ 0.28
HOXD11-202ENST00000498438 ZNF551Q7Z340 670 aaPredicted RBP16.81■□□□□ 0.28
HOXD11-202ENST00000498438 EXOC3L1Q86VI1 746 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 NUDCD3Q8IVD9 361 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 OR4N2Q8NGD1 307 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 OR1J4Q8NGS1 313 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 RND1Q92730 232 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 CIDECQ96AQ7 238 aaPredicted RBP16.81■□□□□ 0.28
HOXD11-202ENST00000498438 PPCDCQ96CD2 204 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 TMCO6Q96DC7 493 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 SLC35A4Q96G79 324 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 ZIM3Q96PE6 472 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 ADOQ96SZ5 270 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 REEP4Q9H6H4 257 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 SSU72Q9NP77 194 aaKnown RBP16.81■□□□□ 0.28
HOXD11-202ENST00000498438 RNF6Q9Y252 685 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 OR10H1Q9Y4A9 318 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 ADGRG4Q8IZF6 3080 aa16.81■□□□□ 0.28
HOXD11-202ENST00000498438 MED12Q93074 2177 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 C15orf38-AP3S2A0A0A6YYH1 394 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 WDR91A4D1P6 747 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 C19orf84I3L1E1 186 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 SNPHO15079 494 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 TSPAN2O60636 221 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 TBX19O60806 448 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 WDR1O75083 606 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 SKAP2O75563 359 aaPredicted RBP16.8■□□□□ 0.28
HOXD11-202ENST00000498438 LYPLA1O75608 230 aaPredicted RBP16.8■□□□□ 0.28
HOXD11-202ENST00000498438 SNRPB2P08579 225 aaKnown RBP16.8■□□□□ 0.28
HOXD11-202ENST00000498438 BCKDHAP12694 445 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 PSG6Q00889 435 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 PDE7AQ13946 482 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 EFR3AQ14156 821 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 TOMM20Q15388 145 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 CES4AQ5XG92 561 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 B3GNT6Q6ZMB0 384 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 ACAD11Q709F0 780 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 PPP1R14CQ8TAE6 165 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 EFHD2Q96C19 240 aaPredicted RBP16.8■□□□□ 0.28
HOXD11-202ENST00000498438 ELP4Q96EB1 424 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 PPP3R2Q96LZ3 170 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 C3orf30Q96M34 536 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 ALKBH4Q9NXW9 302 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 MAPRE3Q9UPY8 281 aa16.8■□□□□ 0.28
HOXD11-202ENST00000498438 ARHGAP21Q5T5U3 1957 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 PEX11AO75192 247 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 MAPK1P28482 360 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 CHRNB4P30926 498 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 ASMTP46597 345 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 CHI3L2Q15782 390 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 ATP6AP1LQ52LC2 224 aa16.79■□□□□ 0.28
HOXD11-202ENST00000498438 EIPR1Q53HC9 387 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms