RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 BCL2A1Q16548 175 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 MED27Q6P2C8 311 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 ZC3HC1Q86WB0 502 aaKnown RBP14.82□□□□□ -0.04
VIM-208ENST00000497849 PLCZ1Q86YW0 608 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 SPATA6LQ8N4H0 392 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 REPS1Q96D71 796 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 OMA1Q96E52 524 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 NAT9Q9BTE0 207 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 RNF122Q9H9V4 155 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 PRM3Q9NNZ6 103 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 NINJ2Q9NZG7 142 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 EHD3Q9NZN3 535 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 PROCRQ9UNN8 238 aa14.82□□□□□ -0.04
VIM-208ENST00000497849 A0A0A6YYD5 115 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 PRAMEF25A6NGN4 478 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 H0YC42 278 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 ZIC3O60481 467 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 NDUFS7O75251 213 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 PPP3CBP16298 524 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 RAP1GDS1P52306 607 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 TPD52P55327 224 aaPredicted RBP14.81□□□□□ -0.04
VIM-208ENST00000497849 HMGCS1Q01581 520 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 EXOC3L2Q2M3D2 409 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 SULT1C3Q6IMI6 304 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 ADAM5Q6NVV9 412 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 C3orf62Q6ZUJ4 267 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 CHMP1BQ7LBR1 199 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 UBQLNLQ8IYU4 475 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 UHMK1Q8TAS1 419 aaKnown RBP14.81□□□□□ -0.04
VIM-208ENST00000497849 RAB3IL1Q8TBN0 382 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 UBE2E3Q969T4 207 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 AMBRA1Q9C0C7 1298 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 DERL2Q9GZP9 239 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 SMYD2Q9NRG4 433 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 ARGLU1Q9NWB6 273 aaPredicted RBP14.81□□□□□ -0.04
VIM-208ENST00000497849 MRPS18CQ9Y3D5 142 aaKnown RBP14.81□□□□□ -0.04
VIM-208ENST00000497849 ALPK2Q86TB3 2170 aa14.81□□□□□ -0.04
VIM-208ENST00000497849 A0A096LNT2 108 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 PGRMC2O15173 223 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 CCNT2O60583 730 aaKnown RBP14.8□□□□□ -0.04
VIM-208ENST00000497849 WISP3O95389 354 aaPredicted RBP14.8□□□□□ -0.04
VIM-208ENST00000497849 SERPINB1P30740 379 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 BSGP35613 385 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 SUCLG1P53597 346 aaKnown RBP14.8□□□□□ -0.04
VIM-208ENST00000497849 DDX39BQ13838 428 aaKnown RBP14.8□□□□□ -0.04
VIM-208ENST00000497849 OR4D1Q15615 310 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 CDKL4Q5MAI5 379 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 STAC2Q6ZMT1 411 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 GPSM1Q86YR5 675 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 WFDC8Q8IUA0 241 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 PDPRQ8NCN5 879 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 OR7G1Q8NGA0 311 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 HUS1BQ8NHY5 278 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 FNDC9Q8TBE3 224 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 ITPAQ9BY32 194 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 CDC42EP4Q9H3Q1 356 aaKnown RBP14.8□□□□□ -0.04
VIM-208ENST00000497849 LYARQ9NX58 379 aaKnown RBP14.8□□□□□ -0.04
VIM-208ENST00000497849 LIPT1Q9Y234 373 aa14.8□□□□□ -0.04
VIM-208ENST00000497849 MAGED1Q9Y5V3 778 aaPredicted RBP14.8□□□□□ -0.04
VIM-208ENST00000497849 CXorf49A8MYA2 514 aaPredicted RBP14.79□□□□□ -0.04
VIM-208ENST00000497849 ERLIN1O75477 346 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 FAM58BPP0C7Q3 252 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 PEPDP12955 493 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 THBS2P35442 1172 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 ARFIP1P53367 373 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 RUNX1T1Q06455 604 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 PLCXD2Q0VAA5 305 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 FGFBP1Q14512 234 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 OR5M10Q6IEU7 315 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 OR52E8Q6IFG1 317 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 EIF1ADQ8N9N8 165 aaKnown RBP14.79□□□□□ -0.04
VIM-208ENST00000497849 FBF1Q8TES7 1133 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 GTPBP3Q969Y2 492 aaKnown RBP14.79□□□□□ -0.04
VIM-208ENST00000497849 LCORQ96JN0 433 aaPredicted RBP14.79□□□□□ -0.04
VIM-208ENST00000497849 PINK1Q9BXM7 581 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 BEX2Q9BXY8 128 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 CD244Q9BZW8 370 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 PCNX3Q9H6A9 2034 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 DDX31Q9H8H2 851 aaKnown RBP14.79□□□□□ -0.04
VIM-208ENST00000497849 WDR41Q9HAD4 459 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 TMEM160Q9NX00 188 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 MOCS1Q9NZB8 636 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 DKKL1Q9UK85 242 aa14.79□□□□□ -0.04
VIM-208ENST00000497849 CCDC151A5D8V7 595 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 C17orf51A8MQB3 221 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 ABCB7O75027 752 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 TNFRSF21O75509 655 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 DPP4P27487 766 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 PIK3R1P27986 724 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 MGAT5Q09328 741 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 MGAT2Q10469 447 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 PON3Q15166 354 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 FAM214BQ7L5A3 538 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 LRRC70Q7Z2Q7 622 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 NEUROG1Q92886 237 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 MTERF1Q99551 399 aaKnown RBP14.78□□□□□ -0.04
VIM-208ENST00000497849 POPDC3Q9HBV1 291 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 CD274Q9NZQ7 290 aa14.78□□□□□ -0.04
VIM-208ENST00000497849 GDF2Q9UK05 429 aaPredicted RBP14.78□□□□□ -0.04
VIM-208ENST00000497849 CADP27708 2225 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms