RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ZNF490Q9ULM2 529 aaPredicted RBP2.49□□□□□ -2.01
PSPC1-205ENST00000497722 NUDCQ9Y266 331 aa2.49□□□□□ -2.01
PSPC1-205ENST00000497722 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.49□□□□□ -2.01
PSPC1-205ENST00000497722 SPAG9O60271 1321 aaKnown RBP2.48□□□□□ -2.01
PSPC1-205ENST00000497722 LGALS8O00214 317 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 E2F3O00716 465 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 SDC3O75056 442 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 ALPPP05187 535 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 IGFBP1P08833 259 aaPredicted RBP2.48□□□□□ -2.01
PSPC1-205ENST00000497722 ALPIP09923 528 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 GSTT2P0CG29 244 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 GSTT2BP0CG30 244 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 ALPPL2P10696 532 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 SDC1P18827 310 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 TSPAN8P19075 237 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 ZBTB25P24278 435 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 ACVR1BP36896 505 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 SGSHP51688 502 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 HAND2P61296 217 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 RPS8P62241 208 aaKnown RBP2.48□□□□□ -2.01
PSPC1-205ENST00000497722 PUDPQ08623 228 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 SNX1Q13596 522 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 PDK1Q15118 436 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 RAB35Q15286 201 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 CD226Q15762 336 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 PKN2Q16513 984 aaKnown RBP2.48□□□□□ -2.01
PSPC1-205ENST00000497722 QRICH1Q2TAL8 776 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 LDLRAP1Q5SW96 308 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 ATRAIDQ6UW56 229 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 TMEM26Q6ZUK4 368 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 PRR22Q8IZ63 422 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 KDM8Q8N371 416 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 PIWIL1Q96J94 861 aaKnown RBP2.48□□□□□ -2.01
PSPC1-205ENST00000497722 CASD1Q96PB1 797 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 SIGLEC12Q96PQ1 595 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 SPXQ9BT56 116 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 NFKBIZQ9BYH8 718 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 RAB17Q9H0T7 212 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 FAM114A2Q9NRY5 505 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 TNFRSF19Q9NS68 423 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 RBM28Q9NW13 759 aaKnown RBP2.48□□□□□ -2.01
PSPC1-205ENST00000497722 DPM3Q9P2X0 92 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 GHRLQ9UBU3 117 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 B4GALT7Q9UBV7 327 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 PURGQ9UJV8 347 aaKnown RBP2.48□□□□□ -2.01
PSPC1-205ENST00000497722 BARX2Q9UMQ3 279 aaPredicted RBP2.48□□□□□ -2.01
PSPC1-205ENST00000497722 RPH3AQ9Y2J0 694 aaPredicted RBP2.48□□□□□ -2.01
PSPC1-205ENST00000497722 RNF115Q9Y4L5 304 aa2.48□□□□□ -2.01
PSPC1-205ENST00000497722 DHX29Q7Z478 1369 aaKnown RBP2.48□□□□□ -2.01
PSPC1-205ENST00000497722 GRIN2DO15399 1336 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 TRBV7-9A0A0J9YWB2 115 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 TTC26A0AVF1 554 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 KRT87PA6NCN2 255 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 CASKO14936 926 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 GJB5O95377 273 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 ETS1P14921 441 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 ARF4P18085 180 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-205ENST00000497722 PRDX6P30041 224 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 AKT2P31751 481 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 SLC6A8P48029 635 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 P2RY4P51582 365 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 KRTAP10-1P60331 282 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 GMFBP60983 142 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 PAX2Q02962 417 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 ASAH1Q13510 395 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 ZKSCAN8Q15776 578 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-205ENST00000497722 TTC31Q49AM3 519 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-205ENST00000497722 PNCKQ6P2M8 343 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 GCNT7Q6ZNI0 430 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 C11orf53Q8IXP5 236 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 OR52E1Q8NGJ3 308 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 NTNG2Q96CW9 530 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 DNAJA3Q96EY1 480 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 MAGEB18Q96M61 343 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 GLT8D2Q9H1C3 349 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 RPAP3Q9H6T3 665 aaPredicted RBP2.47□□□□□ -2.01
PSPC1-205ENST00000497722 ZNF446Q9NWS9 450 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 C1orf123Q9NWV4 160 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 SLC2A6Q9UGQ3 507 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 ODF2LQ9ULJ1 636 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 CLEC4EQ9ULY5 219 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 NPC1L1Q9UHC9 1359 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 ABCC9O60706 1549 aa2.47□□□□□ -2.01
PSPC1-205ENST00000497722 STK17BO94768 372 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 ANP32DO95626 131 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 LY6G6DO95868 133 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 PGK1P00558 417 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 WNT2P09544 360 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 CCDC166P0CW27 439 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 LAMP1P11279 417 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 CYP11B1P15538 503 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 RPA1P27694 616 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 PTPN4P29074 926 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 MAT2AP31153 395 aaKnown RBP2.46□□□□□ -2.02
PSPC1-205ENST00000497722 PRDX2P32119 198 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 NF2P35240 595 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 MDH2P40926 338 aaKnown RBP2.46□□□□□ -2.02
PSPC1-205ENST00000497722 XCR1P46094 333 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 HTR5AP47898 357 aa2.46□□□□□ -2.02
PSPC1-205ENST00000497722 TRPC1P48995 793 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms