RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 PTPN6P29350 595 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 HNRNPH1P31943 449 aaKnown RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 PGM1P36871 562 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 CAPZBP47756 277 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 GABRA4P48169 554 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 ARRB1P49407 418 aaPredicted RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 NUDT2P50583 147 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 DGKQP52824 942 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 CLNS1AP54105 237 aaKnown RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 MTTPP55157 894 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 KCNK10P57789 538 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 PSME3P61289 254 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 RPS15AP62244 130 aaKnown RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 NKX6-1P78426 367 aaPredicted RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 PHEXP78562 749 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 HOXA4Q00056 320 aaPredicted RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 CFHR1Q03591 330 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 FOXM1Q08050 763 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 ACSM2AQ08AH3 577 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 PDE7AQ13946 482 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 ANGPT1Q15389 498 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 DUOXA1Q1HG43 343 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 HLA-BQ31612 363 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 FAM174BQ3ZCQ3 159 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 TMEM35AQ53FP2 167 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 PIGGQ5H8A4 983 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 SPANXN4Q5MJ08 99 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 ACSM2BQ68CK6 577 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 FAM71E1Q6IPT2 247 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 FIGLAQ6QHK4 219 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 C16orf89Q6UX73 402 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 MSANTD1Q6ZTZ1 278 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 RNF44Q7L0R7 432 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 OOSP2Q86WS3 158 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 SLC15A3Q8IY34 581 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 SLC35F3Q8IY50 421 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 DEFB107AQ8IZN7 70 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 GALNT16Q8N428 558 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 ARL10Q8N8L6 244 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 AMER3Q8N944 861 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 OR8J2Q8NGG1 315 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 CLHC1Q8NHS4 586 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 C16orf78Q8WTQ4 265 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 WDR60Q8WVS4 1066 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 PIGKQ92643 395 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 GTF2H4Q92759 462 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 ROPN1LQ96C74 230 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 TM4SF18Q96CE8 201 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 MS4A6EQ96DS6 147 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 RITA1Q96K30 269 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 ZNF285Q96NJ3 590 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 QRFPRQ96P65 431 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 TSSK3Q96PN8 268 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 TEFMQ96QE5 360 aaKnown RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 RAB3IPQ96QF0 476 aaPredicted RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 THAP7Q9BT49 309 aaPredicted RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 THTPAQ9BU02 230 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 SORBS1Q9BX66 1292 aaKnown RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 EBPLQ9BY08 206 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 DPY30Q9C005 99 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 CHRNA10Q9GZZ6 450 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 DENND2DQ9H6A0 471 aaPredicted RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 WDR41Q9HAD4 459 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 MYNNQ9NPC7 610 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 NDE1Q9NXR1 346 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 AHSPQ9NZD4 102 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 SEMA5BQ9P283 1151 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 TMEM181Q9P2C4 612 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 ABCD2Q9UBJ2 740 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 ATP6V1HQ9UI12 483 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 LEF1Q9UJU2 399 aaPredicted RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 MAN2B2Q9Y2E5 1009 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 WBP11Q9Y2W2 641 aaKnown RBP5.03□□□□□ -1.6
GGPS1-208ENST00000497327 GMEB1Q9Y692 573 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 RNF215Q9Y6U7 377 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 U3KQA8 63 aa5.03□□□□□ -1.6
GGPS1-208ENST00000497327 IGHV1OR21-1A0A087WYE8 117 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 LOC105369274A0A096LPK9 316 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 A0A0A6YYD5 115 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 LOC102723532A0A0G2JNH3 316 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 GSAPA4D1B5 854 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 A8MUI8 341 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 H0YGG7 62 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 RTCAO00442 366 aaKnown RBP5.02□□□□□ -1.61
GGPS1-208ENST00000497327 ACOT8O14734 319 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 ANGPT2O15123 496 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 SCAMP2O15127 329 aaKnown RBP5.02□□□□□ -1.61
GGPS1-208ENST00000497327 P2RX6O15547 441 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 NDUFS4O43181 175 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 ZW10O43264 779 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 HCRTR1O43613 425 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 NUDT21O43809 227 aaKnown RBP5.02□□□□□ -1.61
GGPS1-208ENST00000497327 SH3BP5O60239 455 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 PCDH7O60245 1069 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 DFNA5O60443 496 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 MYO1DO94832 1006 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 SORBS2O94875 1100 aaKnown RBP5.02□□□□□ -1.61
GGPS1-208ENST00000497327 UBXN7O94888 489 aa5.02□□□□□ -1.61
GGPS1-208ENST00000497327 GBAP04062 536 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms