RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 BRCC3P46736 316 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 TRPC1P48995 793 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 RPL34P49207 117 aaKnown RBP3.22□□□□□ -1.89
SMC4-225ENST00000497203 RAG2P55895 527 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 LPAL2Q16609 132 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 TMEM44Q2T9K0 475 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 C14orf28Q4W4Y0 310 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 TMEM41BQ5BJD5 291 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 DNAJC21Q5F1R6 531 aaKnown RBP3.22□□□□□ -1.89
SMC4-225ENST00000497203 ZNF343Q6P1L6 599 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 ZNF562Q6V9R5 426 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 GPRIN3Q6ZVF9 776 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 ERICH1Q86X53 443 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 GCNT2Q8N0V5 402 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 MCHR2Q969V1 340 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 SYAP1Q96A49 352 aaPredicted RBP3.22□□□□□ -1.89
SMC4-225ENST00000497203 NTNG2Q96CW9 530 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 ATOH8Q96SQ7 321 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 ADNPQ9H2P0 1102 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 KAT8Q9H7Z6 458 aaKnown RBP3.22□□□□□ -1.89
SMC4-225ENST00000497203 ESM1Q9NQ30 184 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 FAM114A2Q9NRY5 505 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 SLC35D1Q9NTN3 355 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 DCAF13Q9NV06 445 aaKnown RBP3.22□□□□□ -1.89
SMC4-225ENST00000497203 DUS2Q9NX74 493 aaKnown RBP3.22□□□□□ -1.89
SMC4-225ENST00000497203 KLK13Q9UKR3 277 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 ATP6V0A2Q9Y487 856 aa3.22□□□□□ -1.89
SMC4-225ENST00000497203 GRIN2DO15399 1336 aa3.21□□□□□ -1.89
SMC4-225ENST00000497203 TRBV7-9A0A0J9YWB2 115 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 A0A0U1RQV5 110 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 MFSD2BA6NFX1 497 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 WASHC1A8K0Z3 465 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 ERI2A8K979 691 aaKnown RBP3.21□□□□□ -1.9
SMC4-225ENST00000497203 C11orf98E9PRG8 122 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 H3BMH7 237 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 SMPD2O60906 423 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 PEX11AO75192 247 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 SH3BGRLO75368 114 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 IDH1O75874 414 aaKnown RBP3.21□□□□□ -1.9
SMC4-225ENST00000497203 MFN2O95140 757 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 NCF1P14598 390 aaPredicted RBP3.21□□□□□ -1.9
SMC4-225ENST00000497203 TSPAN8P19075 237 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 CALRP27797 417 aaKnown RBP3.21□□□□□ -1.9
SMC4-225ENST00000497203 ADRA1AP35348 466 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 HTR5AP47898 357 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 EMDP50402 254 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 ARHGDIAP52565 204 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 OSTNP61366 133 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 ZNF85Q03923 595 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 EXOSC2Q13868 293 aaKnown RBP3.21□□□□□ -1.9
SMC4-225ENST00000497203 TAF7Q15545 349 aaPredicted RBP3.21□□□□□ -1.9
SMC4-225ENST00000497203 DCAF4L1Q3SXM0 396 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 CYBRD1Q53TN4 286 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 ZNF311Q5JNZ3 666 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 PRR5LQ6MZQ0 368 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 RFWD3Q6PCD5 774 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 LPCAT2Q7L5N7 544 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 CEACAM19Q7Z692 300 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 SLC25A42Q86VD7 318 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 SLC47A2Q86VL8 602 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 CENPLQ8N0S6 344 aaPredicted RBP3.21□□□□□ -1.9
SMC4-225ENST00000497203 ZNF491Q8N8L2 437 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 OR4F17Q8NGA8 305 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 TOMM40LQ969M1 308 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 ELMO2Q96JJ3 720 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 VSTM2LQ96N03 204 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 VPS35Q96QK1 796 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 OR4F4Q96R69 305 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 TBCDQ9BTW9 1192 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 ZNF416Q9BWM5 594 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 COQ10BQ9H8M1 238 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 WDR76Q9H967 626 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.21□□□□□ -1.9
SMC4-225ENST00000497203 RNF24Q9Y225 148 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 EIF3LQ9Y262 564 aaKnown RBP3.21□□□□□ -1.9
SMC4-225ENST00000497203 GON4LQ3T8J9 2241 aa3.21□□□□□ -1.9
SMC4-225ENST00000497203 NOTCH3Q9UM47 2321 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 IGHV3OR16-12A0A075B7B8 117 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 TRIM49BA6NDI0 452 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 TRABD2BA6NFA1 517 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 ACOD1A6NK06 481 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 ZNF487B1APH4 448 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 SHISA9B4DS77 424 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 H0YL77 283 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 IMPA2O14732 288 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 MAPK13O15264 365 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 GALR3O60755 368 aaPredicted RBP3.2□□□□□ -1.9
SMC4-225ENST00000497203 ANP32DO95626 131 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 GSTT2P0CG29 244 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 GSTT2BP0CG30 244 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 H2AFXP16104 143 aaPredicted RBP3.2□□□□□ -1.9
SMC4-225ENST00000497203 HTR2AP28223 471 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 ELK3P41970 407 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 PTGFRP43088 359 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 STK19P49842 368 aaPredicted RBP3.2□□□□□ -1.9
SMC4-225ENST00000497203 METAP1P53582 386 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 HAND2P61296 217 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 KLHL30Q0D2K2 578 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 C17orf58Q2M2W7 97 aa3.2□□□□□ -1.9
SMC4-225ENST00000497203 SNAI3Q3KNW1 292 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms