RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 CT45A8P0DMV1 189 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 CT45A9P0DMV2 189 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 DDX5P17844 614 aaKnown RBP18.9■□□□□ 0.62
COL9A2-211ENST00000496215 GRK2P25098 689 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 IL12BP29460 328 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 GPC1P35052 558 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 ABCE1P61221 599 aaKnown RBP18.9■□□□□ 0.62
COL9A2-211ENST00000496215 PDE7AQ13946 482 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 CDSNQ15517 529 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 ZNF385BQ569K4 471 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 CT45A2Q5DJT8 189 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 TMEM81Q6P7N7 255 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 LIX1Q8N485 282 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 FNDC5Q8NAU1 212 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 CIDECQ96AQ7 238 aaPredicted RBP18.9■□□□□ 0.62
COL9A2-211ENST00000496215 MTERF3Q96E29 417 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 TMEM41AQ96HV5 264 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 C3orf30Q96M34 536 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 DMRTA2Q96SC8 542 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 C1orf50Q9BV19 199 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 C19orf53Q9UNZ5 99 aaPredicted RBP18.9■□□□□ 0.62
COL9A2-211ENST00000496215 C15orf41Q9Y2V0 281 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 OR10H1Q9Y4A9 318 aa18.9■□□□□ 0.62
COL9A2-211ENST00000496215 NOTCH2Q04721 2471 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 PRAMEF25A6NGN4 478 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 PRSS44E7EML9 344 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 UPK1AO00322 258 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 ITM2AO43736 263 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 REM1O75628 298 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 PSMG1O95456 288 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 ELAVL4P26378 380 aaKnown RBP18.89■□□□□ 0.61
COL9A2-211ENST00000496215 RPL3P39023 403 aaKnown RBP18.89■□□□□ 0.61
COL9A2-211ENST00000496215 SNTA1Q13424 505 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 MPP2Q14168 576 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 ZNHIT3Q15649 155 aaPredicted RBP18.89■□□□□ 0.61
COL9A2-211ENST00000496215 DESI1Q6ICB0 168 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 XKRXQ6PP77 449 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 ZNF551Q7Z340 670 aaPredicted RBP18.89■□□□□ 0.61
COL9A2-211ENST00000496215 R3HCC1LQ7Z5L2 792 aaKnown RBP18.89■□□□□ 0.61
COL9A2-211ENST00000496215 SLC44A2Q8IWA5 706 aaPredicted RBP18.89■□□□□ 0.61
COL9A2-211ENST00000496215 ZNF781Q8N8C0 355 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 ANKRD42Q8N9B4 389 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 SARAFQ96BY9 339 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 TUBGCP3Q96CW5 907 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 TMCO6Q96DC7 493 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 ELP4Q96EB1 424 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 ZBED6CLQ96FA7 236 aaPredicted RBP18.89■□□□□ 0.61
COL9A2-211ENST00000496215 SLC35A4Q96G79 324 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 NODALQ96S42 347 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 SLC6A15Q9H2J7 730 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 PNPLA3Q9NST1 481 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 SH3BP4Q9P0V3 963 aa18.89■□□□□ 0.61
COL9A2-211ENST00000496215 LRBAP50851 2863 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 FIGNL2A6NMB9 653 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 SCAMP2O15127 329 aaKnown RBP18.88■□□□□ 0.61
COL9A2-211ENST00000496215 AGAP20933 346 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 BGNP21810 368 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 GRNP28799 593 aaKnown RBP18.88■□□□□ 0.61
COL9A2-211ENST00000496215 ART3Q13508 389 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 EFR3AQ14156 821 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 PDCD2Q16342 344 aaPredicted RBP18.88■□□□□ 0.61
COL9A2-211ENST00000496215 C6orf136Q5SQH8 315 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 BEND6Q5SZJ8 279 aaPredicted RBP18.88■□□□□ 0.61
COL9A2-211ENST00000496215 HHATQ5VTY9 493 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 SLC30A6Q6NXT4 461 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 ANGPTL8Q6UXH0 198 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 LARP4Q71RC2 724 aaKnown RBP eCLIP18.88■□□□□ 0.61
COL9A2-211ENST00000496215 KIRREL3Q8IZU9 778 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 OR5M9Q8NGP3 310 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 ADOQ96SZ5 270 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 PAIP2Q9BPZ3 127 aaKnown RBP18.88■□□□□ 0.61
COL9A2-211ENST00000496215 GALNT9Q9HCQ5 603 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 ACKR4Q9NPB9 350 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 TNFRSF10DQ9UBN6 386 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 RAP2CQ9Y3L5 183 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 DNAJC13O75165 2243 aa18.88■□□□□ 0.61
COL9A2-211ENST00000496215 FBN2P35556 2912 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 ADGRG4Q8IZF6 3080 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 TMEM120BA0PK00 339 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 GNB5O14775 395 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 TSPAN2O60636 221 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 PRPS2P11908 318 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 ENDOUP21128 410 aaKnown RBP18.87■□□□□ 0.61
COL9A2-211ENST00000496215 FRKP42685 505 aaPredicted RBP18.87■□□□□ 0.61
COL9A2-211ENST00000496215 SLC1A6P48664 564 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 MRPS22P82650 360 aaKnown RBP18.87■□□□□ 0.61
COL9A2-211ENST00000496215 PSG6Q00889 435 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 MAD2L1Q13257 205 aaPredicted RBP18.87■□□□□ 0.61
COL9A2-211ENST00000496215 PTGR1Q14914 329 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 EMC4Q5J8M3 183 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 WLSQ5T9L3 541 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 FNDC7Q5VTL7 733 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 SZRD1Q7Z422 152 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 OR1J4Q8NGS1 313 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 NEIL3Q8TAT5 605 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 UBQLN3Q9H347 655 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 ZNF395Q9H8N7 513 aaPredicted RBP18.87■□□□□ 0.61
COL9A2-211ENST00000496215 Q9N2J8 555 aa18.87■□□□□ 0.61
COL9A2-211ENST00000496215 ACSS1Q9NUB1 689 aaPredicted RBP18.87■□□□□ 0.61
COL9A2-211ENST00000496215 SPRR3Q9UBC9 169 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms