RNA–Protein interactions for RNA: ENST00000496076.1

CLTC-208, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-208ENST00000496076 ZNF490Q9ULM2 529 aaPredicted RBP3.18□□□□□ -1.9
CLTC-208ENST00000496076 ZNF256Q9Y2P7 627 aaPredicted RBP3.18□□□□□ -1.9
CLTC-208ENST00000496076 RRP15Q9Y3B9 282 aaKnown RBP3.18□□□□□ -1.9
CLTC-208ENST00000496076 WIPI2Q9Y4P8 454 aa3.18□□□□□ -1.9
CLTC-208ENST00000496076 A0A0J9YVX5 310 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 H0YL77 283 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 XPO1O14980 1071 aaKnown RBP3.17□□□□□ -1.9
CLTC-208ENST00000496076 TNFSF12O43508 249 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 MTX2O75431 263 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 MTRF1O75570 445 aaKnown RBP3.17□□□□□ -1.9
CLTC-208ENST00000496076 GOT2P00505 430 aaKnown RBP3.17□□□□□ -1.9
CLTC-208ENST00000496076 KLK2P20151 261 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 PAX7P23759 505 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 DPP4P27487 766 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 RFC2P35250 354 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 CAPGP40121 348 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 HTR5AP47898 357 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 NDST1P52848 882 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 EXOSC2Q13868 293 aaKnown RBP3.17□□□□□ -1.9
CLTC-208ENST00000496076 KNOP1Q1ED39 458 aaKnown RBP3.17□□□□□ -1.9
CLTC-208ENST00000496076 PARP6Q2NL67 630 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 ZNF699Q32M78 642 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 SLC36A3Q495N2 470 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 ZDHHC21Q8IVQ6 265 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 ARFGAP2Q8N6H7 521 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 OR6F1Q8NGZ6 308 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 FBXO25Q8TCJ0 367 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 ZNF606Q8WXB4 792 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 HPDLQ96IR7 371 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 ANKRD27Q96NW4 1050 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 VPS35Q96QK1 796 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 OVOL2Q9BRP0 275 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 APOOQ9BUR5 198 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 RMND5AQ9H871 391 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 CALHM2Q9HA72 323 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 WDR41Q9HAD4 459 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 NRN1Q9NPD7 142 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 C1orf123Q9NWV4 160 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 ANAPC11Q9NYG5 84 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 FZR1Q9UM11 496 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 SLC9A8Q9Y2E8 581 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 MRPS18CQ9Y3D5 142 aaKnown RBP3.17□□□□□ -1.9
CLTC-208ENST00000496076 KIF25-AS1Q9Y6Z4 181 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 PTPRUQ92729 1446 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 AFF2P51816 1311 aa3.17□□□□□ -1.9
CLTC-208ENST00000496076 PARD3Q8TEW0 1356 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 LOC105371242A0A075B767 164 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 IQCMA0A1B0GVH7 501 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 CLRN2A0PK11 232 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 SHISA9B4DS77 424 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 G3V2L1 256 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 TSPAN2O60636 221 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 STK17BO94768 372 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 UGT2B4P06133 528 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 RPA2P15927 270 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 MAT2AP31153 395 aaKnown RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 RPL9P32969 192 aaKnown RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 CYLC1P35663 651 aaPredicted RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 GBX2P52951 348 aaPredicted RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 NAPAP54920 295 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 ACTR1AP61163 376 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 HERVK_113P63132 956 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 ERVK-8P63133 956 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 CNTN2Q02246 1040 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 MLF2Q15773 248 aaPredicted RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 TPD52L1Q16890 204 aaPredicted RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 ZSWIM7Q19AV6 140 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 LRIT3Q3SXY7 679 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 UNC50Q53HI1 259 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 BEND6Q5SZJ8 279 aaPredicted RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 ATAD3BQ5T9A4 648 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 BLOC1S2Q6QNY1 142 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 FRRS1Q6ZNA5 592 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 Q7L0L9 218 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 LHFPL4Q7Z7J7 247 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 LUZP1Q86V48 1076 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 EFCAB13Q8IY85 973 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 GVQW1Q8N7I0 195 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 OR4F17Q8NGA8 305 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 OR1K1Q8NGR3 316 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 OR4F5Q8NH21 305 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 PCNPQ8WW12 178 aaKnown RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 PNPLA2Q96AD5 504 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 RAB3CQ96E17 227 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 ATXN7L3BQ96GX2 97 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 VSTM2LQ96N03 204 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 ALKBH3Q96Q83 286 aaPredicted RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 OR4F4Q96R69 305 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 WRAP53Q9BUR4 548 aaKnown RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 RBM24Q9BX46 236 aaKnown RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 ERVK-6Q9BXR3 956 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 MRPL13Q9BYD1 178 aaKnown RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 SLITRK2Q9H156 845 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 TSPY26PQ9H489 355 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 RPAP3Q9H6T3 665 aaPredicted RBP3.16□□□□□ -1.9
CLTC-208ENST00000496076 ALG9Q9H6U8 611 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 GORASP2Q9H8Y8 452 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 NMUR1Q9HB89 426 aa3.16□□□□□ -1.9
CLTC-208ENST00000496076 TRPV5Q9NQA5 729 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms